| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1503 |
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| Symbol | |
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| ID | 7385145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1581860 |
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| End bp | 1585165 |
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| Gene Length | 3306 bp |
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| Protein Length | 1101 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643654819 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002552964 |
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| Protein GI | 222110700 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.699543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG CTGCCGCGCA AGCCGCCTAC GAACACAACG GCCAACCGGT CACGCGGGAG
GCCTTCTACG CCATTGCCTG CGACCCGCAG CGCAGCGTGG CCGTGGAGGC CTGCGCCGGC
GCCGGCAAGA CCTGGATGCT GGTCTCGCGC ATGCTGCGCG CGCTGCTGGA CGGCTGTGCG
CCGCACGAGA TCCTGGCCAT CACCTTCACC AAGAAGGCCG CCGGCGAAAT GCGCCAGCGC
CTGCAGGAAT GGCTGCAGGA GTTTGCGGCC AAGCCGCTGC CCGATCTGGA AAAGGAGCTG
ATTGCAAGAG GAATCGGGCC GCAGCGCGCT CTGGAAAAGC GCGAGCAGCT ACAAAAACTA
TACCGTCAGA CGCTGGACGC GGGCCGCCCC GTGCAGATAC GCACCTTTCA CAGCTGGTTT
GCGGCGCTGC TGGGCACGGC GCCGCTGGCG GTGCTGGAGC AGCAGGGCCT GCCCGCCCAT
TACGACTTGC TGGAGGATGA CGCCGAGGCA GTGCGCGAGG TTTGGCGCCC CTACCTCGCC
GCCGTGGCGC AGGACGCCGC GCTGCGCGCG GATTACGAAG CCTGCGTAGC ACATCACGGC
CGCTCGCAGA CGCACAAGGC GCTCGAAGGC GCGCTGGCCA AGCGCGTGGA GTTCGCGCTG
GCCGACGAGG CGGGCGTGGT GGACGCATCG ATCCCGCATT TCGGCACGCA GTTCTCGGAC
CTTGCCGGCT TGCACCATCC GGCCGATGCG CTGGCCAGCG ACGCAGCGCG CCAGCGCTGG
CATGCCTGGG CCCAGGTGCT GGGGGCGCAG GCGAACAAGA CGCCGCAGAA GGCCGCCGAC
GCGGTGATCG ACGCCTGGCT GTGCGACGAC CTGGGCCAGC GTCTGGACAC GCTGCGCAAG
GCCTTCTTCG TGGCCAGCGA GGATCGCCTG TCCAAGAATC TGGAGAAGTT CGCCGCCGCG
CAGGAGGCCG AGGGCGAACT TCAGCGCCTG TGTGCCGCGC GCCGCCAGCA CGAGGCCTGG
CTGCACCAGC AGCGCATGGC GCGGCTGGCG CGTGCGCTCA TCGCGCAGTT CGCCCAGCTC
AAGCGCGAGC GCGGCTGGGT GGACATGAAC GACGTGGAGC GCACGGCGCT GGTCATGCTG
TCCGACCCCA TCCTCTCGGG CTGGGTGCAG GAGCGCCTGG ACGCGCGCGT GCGCCACCTG
CTGGTGGATG AGTTCCAGGA CACCAACCCG CTGCAGTGGC AGGCGCTGCA TGCCTGGCTG
GCCGGTTACG CGGGCGCGGG CGGCGGCCAG CAGCCGCCCA GCGTGTTCAT CGTCGGTGAC
CCCAAGCAGA GCATCTACCG CTTTCGCCGC GCCGAGCCGC AGGTCTTCAA GGCCGCCCAG
GCCTTCGTAC GCGAGGGGCT GGGGGGCGAC CTGCTGGCCT GCGACCACAC GCGGCGCAAC
GCCATCGGCG TGATCGCAGC GGTGAACCGG GCCATGCAGG CGGCGCAGGC GCAGGGCGAG
TACGCGGGCT TTCGCGACCA CACCACCGAA TCGCGCGACC CGGGGCAACT GCTGCGCCTG
CCCCCGATCA CGGCGCCTGA CGGGGGTGAT GCCGCCGCGG CCACTGCCCC CGAGTGGCGC
GACACTCTGA CCCAGCCGCG CCATGAAGCC GAGGAAACCC TGCGCATGCG CGAATGCGCG
CAGGCTGCGC AATGGGTGGC GGCGCAGATC GCCGCGGGCG TGCAGCCGCA GGAGATCATG
GTGCTCGCGC GCAAGCGCGA CCGGCTGGCC TCCCTGCAGG AGGCCCTGCG CGCGCTGCAC
GTGCCCTGCG TGCAGCCCGA GAAGGCCGAG CTGGGCGAGG CGCCCGAGGT GCAGGACATC
GTCGCGCTGC TGGATGCGCT GGTCTCACCG GGGCATGACC TTTCGCTGGC GCGTGCGCTG
CGCTCGCCGC TGTTCGGCCT GACGGATCAC GCGCTGGTGC AGATTGCGCT GCGGGTACGC
CAGACGGCCG CAGAAGGATC CCCGTGCAGC TGGTTCGACG TACTTCAAAA AAGTGAGCTG
CTTCCGCCCG ACCTGCAAGC GCTGGCGCCT GTTTTGGCTC AATACAAGCG ATGGGTGGAA
ACACGCCCCC CCCACGATGC GCTGCATGCC ATCTACGAAC ACGGCGACGT GCCCGCGCGC
TTTGCCGCCG CGGCTCCCGC CTCGCAGCGT GCGGGCGTGC TGGCCAACCT GCGCGCTTTG
CTGGCCGCGG CGCTGCAGCA GGACGGGGGA CGCTACCTCA CGGCCTATGC CTTCGTGCGC
GCCATGAAGC GCCCGGGCAT GCGCGCACCC GGCCGCGTGG AGGCGCAGGC CGTGCGCCTG
CTCACCATCC ACGGCGCCAA AGGGCTGGAG GCGCACAGCG TGCTGCTGCT GGACACCGAT
GCGCGCGCGC AGAAGGCCGA GACCATGGGC GCGCTGGTCG ACTGGCCGGG CGAGCAGGCC
GCTCCGCTGC GCTTTGTCTT TCTGGCCAGC GAATCCAACC CGCCGCCCAG TGCGGTGGAC
CTGCTGGCGG CGGAACTGGC GGAGCGCCAG CGCGAGGAGC TCAACACCCT CTATGTGGCC
ATGACACGCG CCAAGCATTG CCTGGCCTTG TCGGCGGTGC AGTCCAGCAC GGCCGCGCCC
GGCAGTTGGT GGAACCGGCT GGCCGAGTCC CTGCAGGACG CGCCAGTGCC GCCCGCCGCG
CCATTGGGCG ATGTGGCTGA CGATGCCGCC GTCGCGTTGC CGCAGCTTCC GCCGTATGCG
GGGGCTGCGC CGGGGGCACA AGCCGCTGCG GCGGGTGCTC CCGTCTCCAC CCCGCAGTCG
CGCCAGGGCG AGGCCATGCA CCAGTTGCTG GAGCAGGCGG GCGTGGTCGG CGCCCCGCGG
GCGGGCGGCG TGTGGCCCGC GCGGCGGCTG GCGCAGCTGG CGCGTGACTT CGACATCACG
GCGGAGGCCG CCGCACAGGC CGCAGCGATG GCGCGGAGCA TTCTGCAGGG CGAGGGTGCC
TGGGCGTGGA ACCCCGATCA CGTGGAGCAG GCCCTCAACG AAGCGCCGCT GGTGTACCAG
GGCCAGGGTC TGCGTCTGGA CCGCCTGGTG CGGCTGCGCC AGCCGCGTGA GGGTGCGCGC
TGGTGGGTGC TGGACTACAA GAGCGCCACC GCGCCCGAGC GCCAGCCGCA GCTGATGGCC
CAGCTGCGCC TGTACCGCGA AGCGGTGGGA GCGCAGTTTC CGGGCGAACA GGTGGGCGCG
GCTTTCTTGA CGGGCGATGG GAGGCTGGTG GTCGTGGACG CGCCAGGGCA GGGCGTGCTG
TTCTGA
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| Protein sequence | MSEAAAQAAY EHNGQPVTRE AFYAIACDPQ RSVAVEACAG AGKTWMLVSR MLRALLDGCA
PHEILAITFT KKAAGEMRQR LQEWLQEFAA KPLPDLEKEL IARGIGPQRA LEKREQLQKL
YRQTLDAGRP VQIRTFHSWF AALLGTAPLA VLEQQGLPAH YDLLEDDAEA VREVWRPYLA
AVAQDAALRA DYEACVAHHG RSQTHKALEG ALAKRVEFAL ADEAGVVDAS IPHFGTQFSD
LAGLHHPADA LASDAARQRW HAWAQVLGAQ ANKTPQKAAD AVIDAWLCDD LGQRLDTLRK
AFFVASEDRL SKNLEKFAAA QEAEGELQRL CAARRQHEAW LHQQRMARLA RALIAQFAQL
KRERGWVDMN DVERTALVML SDPILSGWVQ ERLDARVRHL LVDEFQDTNP LQWQALHAWL
AGYAGAGGGQ QPPSVFIVGD PKQSIYRFRR AEPQVFKAAQ AFVREGLGGD LLACDHTRRN
AIGVIAAVNR AMQAAQAQGE YAGFRDHTTE SRDPGQLLRL PPITAPDGGD AAAATAPEWR
DTLTQPRHEA EETLRMRECA QAAQWVAAQI AAGVQPQEIM VLARKRDRLA SLQEALRALH
VPCVQPEKAE LGEAPEVQDI VALLDALVSP GHDLSLARAL RSPLFGLTDH ALVQIALRVR
QTAAEGSPCS WFDVLQKSEL LPPDLQALAP VLAQYKRWVE TRPPHDALHA IYEHGDVPAR
FAAAAPASQR AGVLANLRAL LAAALQQDGG RYLTAYAFVR AMKRPGMRAP GRVEAQAVRL
LTIHGAKGLE AHSVLLLDTD ARAQKAETMG ALVDWPGEQA APLRFVFLAS ESNPPPSAVD
LLAAELAERQ REELNTLYVA MTRAKHCLAL SAVQSSTAAP GSWWNRLAES LQDAPVPPAA
PLGDVADDAA VALPQLPPYA GAAPGAQAAA AGAPVSTPQS RQGEAMHQLL EQAGVVGAPR
AGGVWPARRL AQLARDFDIT AEAAAQAAAM ARSILQGEGA WAWNPDHVEQ ALNEAPLVYQ
GQGLRLDRLV RLRQPREGAR WWVLDYKSAT APERQPQLMA QLRLYREAVG AQFPGEQVGA
AFLTGDGRLV VVDAPGQGVL F
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