| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1499 |
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| Symbol | |
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| ID | 7385141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1575656 |
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| End bp | 1577164 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643654815 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002552960 |
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| Protein GI | 222110696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGCC CAAAGGACCG GGCGCTGCGA ACGAAATTGC GGATTACCAT CGCCGGCCTG
CGTATGCCCT TCGCCCTCCC CGCCCTCGTG TCGCTCCTTG ACAGCCCAGC GCTGCGCACG
GGCCTGCTCG GGATCTGCGT CACAGTCGCC GGATGCATGG CAGGGGTGCG AACGGACGTG
CCCTCCCCTG CGCTGCTGCC CGCCGCATGG CCCGTGCCAC CCGTCGCCTT CGATGACAGC
ACCGTCAGCG TTGACGACCA GGCCGAGTGG GGGATGTTCT ACCGCGACCC CACACTGCAA
GGCCTGGTGC GCCAGGCGCT CGAGAACAAC CGCGACCTGC GCCTGGCAAT GCTGCGCGTG
GACGAGGCGC GCGCCGCCCT GGGCCTGCAG TCCGCCGAAC GCTGGCCGAC CCTGGCCGTG
GGCAGCAGCC ACACCCGCGC ACGCGTGCCG GGGGACCTGA ACGTGAGCGG CCGCGCCGTC
ACCACCGGCG AGCACCGCGT GGGCCTTGCC ATCAGCAACT GGGAGCTGGA TCTGTGGGGC
CGCGTGCGCA GCCTGGAGGC GGCAGCGCAG CAGGCCTACT TCGCCTCCGC CGAAGGCAGC
CGCGCCGCCC AGGCCGCACT GGTGAACCAG GTGGCACGCA ACTACCTCGC ATGGCGCGAA
ACGCAGGAAC GCATCGCGCT GACAGAAGAC ACCATCGCCA CGCGCCGCGA GAGCCTGCGC
ATCTTCGGGC GCCGCCACGC GGCCGGCGCC ATCTCGCGCC TGGCGCTGAC GCAGGTGGAA
TCTCTGCTGT ACCAGGCCGA ATCCATCGGC ACCCAGCTCG CGCAGCAGCA GGCACTGCAG
GCCCATGCGC TGGCGCAGCT CGTGGGCGTA CCGTGGGATG CGCTGGCCCT GGCGCCGCCC
CAGGCTGCCG TCGCCCTTCC CACCGTGCCC GCGGGATTGC CTTCCGACCT GCTGCTGCGC
CGCCCCGACA TTGCCGCCGC CGAGCACACC CTGCACGCCG CCAACGCCCG CGTGCAAGCC
GCGCGCGCAG CGTTCTTTCC GCGCATCGCT CTGACCACGA GTGCGGGCAC CGCCAGCGCG
CACCTGGACG GCCTGTTCGA CAGCGGCAGC CGCGCCTGGA CGTTCGCTCC CAGCATCTCT
GTGCCGCTCT TCGACGGCGG GCGCCTGCAG TCCAACCTGG ATCTGAGCGC CGCACGCCAG
AACATCGCTG TGGCCGACTA CGAAAAGACC GTGCAGACGG CCTTCCGCGA AGTGTCAGAC
GCATTGGCCA CGCGCGCCAC GGCAGCGCGC CAGATCACGC TGCAGCAGGC CCAGCGCGAC
GCCTTGCATG AACGCGCACG TTTGGCGCAA CTGCGCTACG ACCACGGTGC CACGCCCTAC
TTCGAAGTGC TGGATGCCCA GCGCGACCTG CTGGCCGCCG AGCAGCAACT CGTGCAGGCA
CGCTATGCGC TACAGGCAGC ACACATCGCC GTCTATGCCG CGCTGGGCGG CGGCGCGCCC
GCGCGCTGA
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| Protein sequence | MGRPKDRALR TKLRITIAGL RMPFALPALV SLLDSPALRT GLLGICVTVA GCMAGVRTDV
PSPALLPAAW PVPPVAFDDS TVSVDDQAEW GMFYRDPTLQ GLVRQALENN RDLRLAMLRV
DEARAALGLQ SAERWPTLAV GSSHTRARVP GDLNVSGRAV TTGEHRVGLA ISNWELDLWG
RVRSLEAAAQ QAYFASAEGS RAAQAALVNQ VARNYLAWRE TQERIALTED TIATRRESLR
IFGRRHAAGA ISRLALTQVE SLLYQAESIG TQLAQQQALQ AHALAQLVGV PWDALALAPP
QAAVALPTVP AGLPSDLLLR RPDIAAAEHT LHAANARVQA ARAAFFPRIA LTTSAGTASA
HLDGLFDSGS RAWTFAPSIS VPLFDGGRLQ SNLDLSAARQ NIAVADYEKT VQTAFREVSD
ALATRATAAR QITLQQAQRD ALHERARLAQ LRYDHGATPY FEVLDAQRDL LAAEQQLVQA
RYALQAAHIA VYAALGGGAP AR
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