| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1399 |
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| Symbol | |
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| ID | 7382651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1467545 |
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| End bp | 1468222 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643654717 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_002552863 |
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| Protein GI | 222110599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGG TGTCTTTCAC GGCGGTGCGC GGGGTGTTGT TCGACCTGGA TGGCACCTTG
ATCGATAGTG CGCCTGACCT GGGCTTTGCT GCGGACCAGT TGCGGTCCGT CCGCGGGCTC
CCTTCGCTGC CGCTGGAGGC CTATCGTCCC CTGGCCGGCG CGGGCGCGAG GGGTATGTTG
TCGGTGGCAT TCGGTATCAC GCCGGACCAT CCGGACTTTC CCGGCTTGAG GGAAGAGTTT
TTCACCAACT ACGAGCAATG CATCCACGAT CAAACGGCAT TGTTTCCTGG CATCCAGGAA
TTGGTGGCTA CTCTTGAGCA TCGTCCGTTG AAATGGGGTG TGGTGACCAA TAAAGTGGAG
CGTTTTACCT CGCTCATCGC CCAGCGCGTG GCGCTTTTCG CCAATGCGGG GGCCATCGTC
AGTGGAGACA CCACTGCGTA TTCCAAGCCC CACCCAGAGC CTTTGTGGGA GGCTGCACGG
CGTCTTGGGC TGGAGCCGTA CGAGTGTATT TACGTCGGTG ACGACGAAAG AGATATTCAG
GCAGGGCAAG CTGCAGGCAT GAAAACCGTG GTGGCCATGT ACGGCTATCT TGGCTCGGGC
GCCTCCCCGA AGAGTTGGGG CGCGGATGCA GAGATTTATT CCCCCCTTGA CCTCTTGAAA
TTGATGGGCC TGGACTAA
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| Protein sequence | MSEVSFTAVR GVLFDLDGTL IDSAPDLGFA ADQLRSVRGL PSLPLEAYRP LAGAGARGML
SVAFGITPDH PDFPGLREEF FTNYEQCIHD QTALFPGIQE LVATLEHRPL KWGVVTNKVE
RFTSLIAQRV ALFANAGAIV SGDTTAYSKP HPEPLWEAAR RLGLEPYECI YVGDDERDIQ
AGQAAGMKTV VAMYGYLGSG ASPKSWGADA EIYSPLDLLK LMGLD
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