| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1392 |
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| Symbol | |
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| ID | 7382644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1457913 |
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| End bp | 1459934 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643654710 |
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| Product | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase |
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| Protein accession | YP_002552856 |
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| Protein GI | 222110592 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0283] Cytidylate kinase |
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| TIGRFAM ID | [TIGR00017] cytidylate kinase
[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.121243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTCCA CCGCGTTCCT CGACCTGCCG CCCCTGGCCA GCGTGCAGGG CAGCGTGCAG
CTGCCGGGCT CCAAGAGCAT CTCCAACCGC GTGCTGCTGC TGGCCGCGTT GAGCCAGGGC
ACGACCGAGG TGCGCGACCT GCTGGCCTCC GACGACACGC GCGTGATGCT GGATGCGCTG
CGCCAGCTCG GCTGCACGGT CGACGAAGCC GGAGGCGGCA CCGTGCGCAT CACGGGTTTG
GGATCGTCCA CGCCGCCCTC GCCCACGCAG CTCTTCATGG GCAACGCCGG CACAGCCATG
CGCCCGCTCA CCGCGGCACT GGCGCTGCTG GGCGGCGAGT ACGAACTGTC GGGCGTGCCG
CGCATGCACG AGCGTCCCAT TGGCGACCTG GTGGACGCCC TGCGCCAGCT CGGCTGCCGC
ATCGACTACC TGGGCAACCA AGGCTTTCCA CCGCTGCGCA TCGCCCACGC GGGCGGCCTG
CCGCCGCTGC AGCTGCAGGC GCCGATCCGC GTGCGCGGCG ACGTGTCCAG CCAGTTCCTC
ACCGCGCTGC TGATGGCGCT GCCGCTGGTG GCCCGGCAGC AGGACGTGGT GATCGAAGTC
GTGGGTGAGC TGATCTCCAA GCCCTACATC CACATCACGC TGGAGCTGCT GGCGCGCTTT
GGCATCGCCG TGCGGCACGA GCAGTGGCAG CGCTTCACCA TTCCCGCGGG CAGCCGGTAC
CAATCGCCGG GGCTGATCCA TGTGGAGGCG GATGCATCAT CTGCTAGCTA TTTCATAGCT
GCTGGCGCAA TCGCTGCGGG CGCTAACGGC CAAAACGGCA TCAAGATCCT GGGCGTCGGA
TTGGACTCGA TCCAGGGCGA CATCCGCTTC GTCGAGGCGG CGCAGGCCAT GGGCGCACGC
GTCACCGGCG GCCCCAACTG GCTGGAGGTG GCCCGCGACA CCTGGCCGCT CAAGTCGATC
GACCTGGACT GCAATCACAT CCCCGATGCA GCGATGACCC TCGCCGTCAT GGCGCTGTAT
GCGCGGGGCA CGACCGTATT GCGCAACATC GCAAGCTGGC GCGTCAAGGA AACCGATCGC
ATTGCCGCCA TGACCTGCGA GCTGCGCAAG CTGGGCGCCA CGGTGGAGGA AGGCGCGGAC
TACCTGTGCG TCACGCCACC CGCCCAGTCC GGCGACTGGC GCGCCGCCAG CATCCACACC
TACGACGACC ACCGCGTGGC CATGTGCTTT TCGCTGGCGG CCTTCAACCC GGCCGGACTG
CCCGTGCGCA TCGAAGACCC CAAGTGCGTC GCCAAGACCT TCCCGGATTA CTTCGAGGCC
CTGTTCCAGG TGGCGCAGAC CGACGCGGAC CGCATCCCCG TGATCTGCAT CGACGGCCCG
ACGGCCTCGG GCAAGGGCAC GGTGGCCGCT GCCGTGGCGC GTGCGCTGGG CTACCACTTC
CTGGATTCGG GGGCGCTGTA CCGCATCACC GCCCTCGCGG CGACCCGTGC GGGCCTGGAG
ATCAGCCCCG ACAACGAGCC GCGCATCGCC GAACTGGCGC GGCAACTGCC CGTGCGCTTC
GCGGGCGACC GCATCTGGCT GGGTGAGGAA GACGTCACCG ACGCCATCCG CACCGAGCAG
GCCGGCATGA ACGCCTCGCG CGTGTCGGCG CTGCCGGCGG TGCGCGGCGC CCTGGTCGCG
CTGCAGCATG GCTTTCGCCG CCTGCCGGGC CTGGTGGCCG ACGGGCGCGA CATGGGCACG
GTGATCTTCC CGCAGGCACC GCTCAAGGTC TTCCTCACGG CCAGCGCCGC CTGCCGGGCC
GAGCGCCGCT ATAAGCAGTT GATTTCCAAG GGAATTTCGG CTAATATCGC CGACCTTCGC
GCAGACTTGG AAGCGCGGGA CGCGCGGGAC GCAAACCGCA GTGCCTCGCC CCTGAAGCCC
GCGCAGGACG CCCTGGTACT GGACAACTCC GAGCACACGA TCGACGAGGC CGTGATGCAG
GTGATTGACT GGTGGCAGGC TCGCCAGCCG TTCGGCGCGT AA
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| Protein sequence | MFSTAFLDLP PLASVQGSVQ LPGSKSISNR VLLLAALSQG TTEVRDLLAS DDTRVMLDAL
RQLGCTVDEA GGGTVRITGL GSSTPPSPTQ LFMGNAGTAM RPLTAALALL GGEYELSGVP
RMHERPIGDL VDALRQLGCR IDYLGNQGFP PLRIAHAGGL PPLQLQAPIR VRGDVSSQFL
TALLMALPLV ARQQDVVIEV VGELISKPYI HITLELLARF GIAVRHEQWQ RFTIPAGSRY
QSPGLIHVEA DASSASYFIA AGAIAAGANG QNGIKILGVG LDSIQGDIRF VEAAQAMGAR
VTGGPNWLEV ARDTWPLKSI DLDCNHIPDA AMTLAVMALY ARGTTVLRNI ASWRVKETDR
IAAMTCELRK LGATVEEGAD YLCVTPPAQS GDWRAASIHT YDDHRVAMCF SLAAFNPAGL
PVRIEDPKCV AKTFPDYFEA LFQVAQTDAD RIPVICIDGP TASGKGTVAA AVARALGYHF
LDSGALYRIT ALAATRAGLE ISPDNEPRIA ELARQLPVRF AGDRIWLGEE DVTDAIRTEQ
AGMNASRVSA LPAVRGALVA LQHGFRRLPG LVADGRDMGT VIFPQAPLKV FLTASAACRA
ERRYKQLISK GISANIADLR ADLEARDARD ANRSASPLKP AQDALVLDNS EHTIDEAVMQ
VIDWWQARQP FGA
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