| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1337 |
|---|
| Symbol | |
|---|
| ID | 7382426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1400017 |
|---|
| End bp | 1401105 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643654655 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_002552801 |
|---|
| Protein GI | 222110537 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGGCA ACCAAGACTT CCAGGGGGCG ATGTTCAGCT ACATCAGCCT TGAAGAGCGC
GTGCCGCAGG CACACCCGCT GCGCAAGTTG CGCGCGGTGG TTGATGCGCT GCTGGCAACC
ATGAACCGCG AATTCGAAGC GGTGTACGCC CGCCGTGGCC GCCCATCGGT GCCACCGGAG
ATGCTGCTCA AGGCCTTGCT GCTGCAGATC CTGTTCTCCA TCCGCAGCGA GCGCCAGTTG
GTCGAAGCGA TCAACTACAA CCTGCTGTAC CGCTGGTTCG TAGGCCTGAA CATCGAAGAC
AAGGTCTGGG ACCACTCCAC TTTCAGCGCC AACCGCGAAC GTCTGTTCAA CGAAGACCTC
GCCCGCACCT TCTTCGAGCG CGTCAAGCTC AGTGCCCAGT GGGGCAAGCT CGCCAGCGAC
GAGCACTTCA GCGTGGACGG CACGCTCATT GACGCCTGGG CCTCGCACAA GAGCTTCAAG
CGCAAAGATG ACGACAGCGG CACGCCGCCT GGGCGCAACC CCGAGGTGGA CTTCAAGGGG
CAGGAGCGCT GCAACGACAC CCACAAGAGC ACCACGGACG CCGATGCCCG GCTGTTCAAG
AAGAGCCGGG GCGACAAATC CCGCCTGTGC CACATGGGAC ACATCCTCAT GGAGAACCGC
AACGGGCTGA TCGTGGATGT CGAGATCACC CATGCCAGCG GCACGGCCGA GCGCGAGGCG
GCACTGGCCA TGTTGGAGCG TCGGGGCAAC AGGAACAAAC GGGCCACGGT CGGTGCCGAC
AAGGGCTACG ACAGCAAGGC CTTCATCAAA GGCTGTCGCA AGCTCAAAGT CACGCCCCAC
GTGGCGGCCA AGGACAAACA CTCGGCGGTG GATGCGCGAG TGACACGGCA CGAGGGCTAC
AAGACCAGCC TGAAGGTGCG CAAGCGCATC GAAGAGGCCT TTGGCTGGAT CAAGACCGTC
GGTGGTCTGG CAAAGACCAA GCTGATCGGT CAGGCCAAGC TCACGGGCCA GGCGCTGCTG
TGCTTTGCCA CCTACAACCT TGTGCGAATG GGCAGCATCG GCGGCTGGTG GAACGCGCAT
CATGCGTGA
|
|---|
| Protein sequence | MRGNQDFQGA MFSYISLEER VPQAHPLRKL RAVVDALLAT MNREFEAVYA RRGRPSVPPE
MLLKALLLQI LFSIRSERQL VEAINYNLLY RWFVGLNIED KVWDHSTFSA NRERLFNEDL
ARTFFERVKL SAQWGKLASD EHFSVDGTLI DAWASHKSFK RKDDDSGTPP GRNPEVDFKG
QERCNDTHKS TTDADARLFK KSRGDKSRLC HMGHILMENR NGLIVDVEIT HASGTAEREA
ALAMLERRGN RNKRATVGAD KGYDSKAFIK GCRKLKVTPH VAAKDKHSAV DARVTRHEGY
KTSLKVRKRI EEAFGWIKTV GGLAKTKLIG QAKLTGQALL CFATYNLVRM GSIGGWWNAH
HA
|
|---|
| |