| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1331 |
|---|
| Symbol | |
|---|
| ID | 7382420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1390026 |
|---|
| End bp | 1391231 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643654650 |
|---|
| Product | protein of unknown function DUF955 |
|---|
| Protein accession | YP_002552796 |
|---|
| Protein GI | 222110532 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2856] Predicted Zn peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000196734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG GAGGTATTCA AGGCTTTGAG AGTGAGCGCC TCAGTCAGAT TCTTGCCGCG
AGGCGTTTGA GCCAGGCGCA ACTTGCCTCG CTGGTCGGCG TGTCCCCCGC AACGGTCAGC
AAATGGCGTT CGGGCAATCA GGCCCCCGAA CGTGAAACCC TGGAGCGTCT TGCCGGCGTG
GTCAATGTCA CGCCTGAATG GTTCACCCGG GCGCCCTCTG CCAAGGTGTC GCTGCCGCTG
TTTCGTAGCA ATGCGTCCGC CCACGTGGCG GCACGTGCGA TGCTGGAAGC GCGCATGGAG
TGGGCGCAGG ACGTCGCGCT CGCGTTGTCG GAGTTCGTGG ACTATCCGAC ACTGAATTTG
CCGATCCGGC AGTTCAAAGA GCCCGACGAG ATCACGCCTG ACGAGATTGA GCTGGCGGCG
AGCGAGTGCC GCGATCTTTG GCGTATCGGC CGCACGGCGG TGCCGGACTT GGCGCTGGCC
ATTGAAGGCG CTGGCGTCGT CCTGATCCGC GAGGAAACTG GCATTTCGCA GATCGAGGGC
CTGTCGGCAT GGAGCGATGC GCTGGGGCGT CCGCTGGTCT TGCTCTCGGC CGACAAGGAT
AACGGCTATC GAAGCCGCTT CGACTTGGCG CACGAACTCG GCCACCTGAT CCTGCATCGG
TTCATTCCCC GACCGACTGA GCGTGACCGC CATAAGCAGC TGGAACAGCA GGCCCATCGC
TTTGCGGGCG CGTTCCTGCT GCCGGCGGAA ACATTCGCGA GTGAGGTCCG CACGCCAGTC
ACGCTGGACG ATCTTCTCTT GCTCAAACGC AGATGGGGTG TTTCCGTCGC GGCGATCGTG
ATGCGTCTGC GTGCGTTGAA GATTCTCGAT GAAGAGGCGG CGCAGTCACT CTTCAAACGA
CGGTCCGCAC GTTGGGGCGC CAAGTCCGAG CCGGGCGATG GCGATAGGTC GCCAGAACGG
CCGCGCCTGC TACGTCGAAC GATCGATCTT CTTGTCGAGG AGAACGTGAT GCCCCTCGAC
TCGATCCCCA GGCACATTGG CTTGGCGGCC CATGACATTG AGATGCTGGC GGGCTTGTCG
GAAGGATACT TTCAGGGCAA ACCCAAGGTT GTGCAGTTGG CTCGTTTGCG TTCAGCGCCC
AGCCCGGATG CACCTGTTGC CACGGAAGGC AATGTCGTGC CGTTTAGATT TACGCCGAAG
CGTTGA
|
|---|
| Protein sequence | MSRGGIQGFE SERLSQILAA RRLSQAQLAS LVGVSPATVS KWRSGNQAPE RETLERLAGV
VNVTPEWFTR APSAKVSLPL FRSNASAHVA ARAMLEARME WAQDVALALS EFVDYPTLNL
PIRQFKEPDE ITPDEIELAA SECRDLWRIG RTAVPDLALA IEGAGVVLIR EETGISQIEG
LSAWSDALGR PLVLLSADKD NGYRSRFDLA HELGHLILHR FIPRPTERDR HKQLEQQAHR
FAGAFLLPAE TFASEVRTPV TLDDLLLLKR RWGVSVAAIV MRLRALKILD EEAAQSLFKR
RSARWGAKSE PGDGDRSPER PRLLRRTIDL LVEENVMPLD SIPRHIGLAA HDIEMLAGLS
EGYFQGKPKV VQLARLRSAP SPDAPVATEG NVVPFRFTPK R
|
|---|
| |