| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1323 |
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| Symbol | |
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| ID | 7382412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1383247 |
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| End bp | 1383951 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654642 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_002552788 |
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| Protein GI | 222110524 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.30693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTCA GAAAACCGCA GGTGCGCTAT GCCGACACGC CGCACCCTGC CACGCCGTAC
CAAGCTGCCG GCCAGGTGTG GGACGACCGT ATCGGCTCAC CGCGCGTGCA GGCGAAGAAC
TGGCGCCTGA TGGCCCTCGG CTGCCTGACG CTCGCGCTGT TGATGGCCGG TGGCCTGGTG
TGGCGCTCGG CGCAGTCCAT CGTGACGCCC TACGTCGTGG AAGTGGACAA CGCGGGACAG
GTGCGCGCCG TGGGCGAAGC CGCCACGCCG TACCGGCCCA ACGATGCACA GACGGCGCAC
CACATCGCGC GCTTCGTGAC GCTGGTGCGC TCGCTGTCCA TCGACCCCAT CGTCGTCCGC
CAGAACTGGC TCGACGCCTA CGACTACACG ACCGACAAGG GCGCGGCCGT GCTCAACGAC
TACGCGCGGG TCAACGACCC GTTCGCGCGC ATCGGCAAGG AGTCGGTGAC GGTGCAGATC
ACCAGTGTCG TGCGCGCTAG CGATACGTCT TTCAACGTGC GCTGGACGGA ACGCCGCTAC
GTCAACGGCG CCGCGGCTGG CCTGGAGCGG TGGACGGCCG TGGTGTCCAT CGTGCTCCAG
CCGCCGCGCA CCGAAGAACG CCTGCGCAAG AACCCCTTGG GCATCTACGT CAACGGGCTG
TCGTGGAGCC GCGAACTGGA TGCGTCCGAA GGAGCCAAGC CATGA
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| Protein sequence | MRFRKPQVRY ADTPHPATPY QAAGQVWDDR IGSPRVQAKN WRLMALGCLT LALLMAGGLV
WRSAQSIVTP YVVEVDNAGQ VRAVGEAATP YRPNDAQTAH HIARFVTLVR SLSIDPIVVR
QNWLDAYDYT TDKGAAVLND YARVNDPFAR IGKESVTVQI TSVVRASDTS FNVRWTERRY
VNGAAAGLER WTAVVSIVLQ PPRTEERLRK NPLGIYVNGL SWSRELDASE GAKP
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