Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1319 |
Symbol | |
ID | 7382408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1378305 |
End bp | 1380764 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643654638 |
Product | conjugal transfer ATPase TrbE |
Protein accession | YP_002552784 |
Protein GI | 222110520 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAACC TCGCCGAATA TCGACAGCGT CCGGCCCTGC TCGCCGACTG GCTTCCGTGG GCCGGGCTGG TCGCGCCGGG CGTCGTCTTG AACAAGGATG GCAGTTTCCA GCGCACGGCG CGCTTTCGTG GGCCTGACCT CGACAGCGCG ACGCAGGGCG AGCTGATCGC CACGTCGGCG CGCTTGAACA ACGCGCTGCG CCGGCTCGGC TCGGGCTGGG CGCTCTTCAT CGAGGCCGAG CGCCGGCCCG CCGCCAACTA TCCGCACTCG GAGTTCCCCG AGCCTTTGTC GTGGCTGGTG GACGAGGAAC GCCGGGCCAC CTTCGAGGAA TCGGGCAACC ACTTCGAGAG CGGTTATCAC CTGACACTGG CGTACCTGCC GCCCGAGGAA TCACGCGCCC GCGCGGAGGG GATGCTGTAC GAGAACCGTC CCACCGAAGG CGTGGACTGG CGCGAGCGCC TGACGGCCTT CGTGGCGGAA ACGGATCGCG TCTTTGACCT GCTCGATGGC GTGATGCCGG AGATAGCCTG GATCGATGAC GGGCAGACGC TGACCTACCT GCACGCGACC ATCTCGACGC GGCGCTATCG AGTGGCGGTG CCCGAAGTGC CGTTTCACAT CGACGCGCTG CTGGCCGATT CCGCACTGGT CGGTGGCTTG GCTCCCATGC TGGGCGAGCA GCACCTGCGC GTGGTGTCGG TGCGGGGTTT TCCGACCTCG ACCTGGCCGG GGATTCTGGG CGAACTCAAC CGCCTGGGCT TTGCCTATCG CTGGAGTACG CGCTTTCTCT GCCTGGACAA AGCCGAGGCG GAAAACGAAC TCACCCGCCT GCGCCGCCAA TGGTTTGCCA AGCGCAAAAA CGTGATGGCG CTGCTGCGCG AGACCATCTT CCAGCAGGAA TCGCCGCTGG TCGATACCGA CGCCAGCAAC AAGGCGGCCG ACGCCGATGC CGCCTTGCAG GAGCTGGGCG GCGATCAAGT CGCCTTCGGT TACCTCACCG CCACGGTGAC GGTGCTCGAT GCCGATCCGG CCGTGGCCGA CGAGAAGCTG CGCATGGTAG AGCGCGTCAT CCAGGGCCGG GGCTTTGTGA CGATTCCCGA AACCCTGAAC GCGGTCGATG CTTGGCTGTC TTCGATCCCT GGCAACGCCT ACGCCAATGT GCGCCAGCCC ATCGTCTCGA CGCTGAACCT GGCGCACATG ATGCCGGTGT CGGCGGTGTG GGCCGGGCCG GAGAAGAACG CGCACCTCGA TGGCCCGCCG CTGATCGTCA CGCGCACCGA CGGCGCGACG CCGTTCCGGC TGGTCACGCA CATCGGCGAC GTGGGCCACA CGCTGGTCGC TGGCCCGACG GGCATGGGCA AGTCCGTCTT GCTCGCCATG CTGGCTATGC AGTTCCGGCG CTACTCCGGC TCGCGCATCT TTGCCTTCGA CATGGGCCGC TCCATGCGCG CCACCATCCT CGGGCTGGGC GGCGAGCACT ACGACCTGGG TGCCGATGGC GAAATTGCCT TCCAGCCGCT CGCGCGCATC GACCGCGAGG GCTACCGCAC CTGGGCCGCT GAATGGATCG AAGGCAGACT ACTACATGAA GGCGTGGCGG TCGGCCCCGA TGAGAAGGTC GCAATCTGGT CGGCGCTGGG AAGCCTCGCC GGTGCGCCGC TGGAGCAGCG CACCGTGACC GGGCTTTCCG TGCTGCTGCA ATCGAACGCG CTGCGCCAGG CCCTCGCGCC CTATGTGCTC GGTGGCGCCC ACGGCAGGCT TCTGGACGCC GACCATGACC AGCTGGGCAT GGCCGACGTG CAGTGCTTCG AGATGGAGGA ACTGATGCAC AGCAAGGCCG CCGTCATGGC CGTGCTGGGC TATCTGTTCG CGCGCTTCGA CGAACGCTTC GACGGTGCGC CCACGCTGCT GATGCTCGAT GAGGCGTGGC TGTTTCTCGA TGACCTGGTA TTCGCGGCAC GCATCCGGCA GTGGCTCAAG ACGCTGCGCA AGAAGAACGT GTCGGTGATC TTCGCTACGC AGAGCCTTGC CGACATCAAG GATTCGAGCA TTGCGCCCGC GATCATCGAA AGCTGCGCCA GCCGCATTTT CCTGCCCAAC CCGCAGGCCA CCGAGCCGCA GATTCGCACG ATCTACGAGG GCTTCGGGTT GAACTCGCGC CAGATCGAGA TCGTGGCGAC CGCGCAGCCC AAGCGCGACT ACTACTACCA GTCCCGCCTC GGCAATCGCC TGTTCGACCT CGACCTGGGG CCGGCCACGC TGGCCTTTGC GGGCGCTTCC ACGCCGCAGG ACCAGCGCGA CATGGATCGC GTGTTGCTGG ATGCCGGCGT GACCGGCTTC GCGGGCGCCT GGCTGCGCCA TCGCAGGCTC GATTGGGCGG CCGACCTGCT GCCCTCACTC CCCGGACTTG CGCCGGGTTC CTCTCGTACC GCTGACCACC CACAGGAGAA CCAGCCATGA
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Protein sequence | MLNLAEYRQR PALLADWLPW AGLVAPGVVL NKDGSFQRTA RFRGPDLDSA TQGELIATSA RLNNALRRLG SGWALFIEAE RRPAANYPHS EFPEPLSWLV DEERRATFEE SGNHFESGYH LTLAYLPPEE SRARAEGMLY ENRPTEGVDW RERLTAFVAE TDRVFDLLDG VMPEIAWIDD GQTLTYLHAT ISTRRYRVAV PEVPFHIDAL LADSALVGGL APMLGEQHLR VVSVRGFPTS TWPGILGELN RLGFAYRWST RFLCLDKAEA ENELTRLRRQ WFAKRKNVMA LLRETIFQQE SPLVDTDASN KAADADAALQ ELGGDQVAFG YLTATVTVLD ADPAVADEKL RMVERVIQGR GFVTIPETLN AVDAWLSSIP GNAYANVRQP IVSTLNLAHM MPVSAVWAGP EKNAHLDGPP LIVTRTDGAT PFRLVTHIGD VGHTLVAGPT GMGKSVLLAM LAMQFRRYSG SRIFAFDMGR SMRATILGLG GEHYDLGADG EIAFQPLARI DREGYRTWAA EWIEGRLLHE GVAVGPDEKV AIWSALGSLA GAPLEQRTVT GLSVLLQSNA LRQALAPYVL GGAHGRLLDA DHDQLGMADV QCFEMEELMH SKAAVMAVLG YLFARFDERF DGAPTLLMLD EAWLFLDDLV FAARIRQWLK TLRKKNVSVI FATQSLADIK DSSIAPAIIE SCASRIFLPN PQATEPQIRT IYEGFGLNSR QIEIVATAQP KRDYYYQSRL GNRLFDLDLG PATLAFAGAS TPQDQRDMDR VLLDAGVTGF AGAWLRHRRL DWAADLLPSL PGLAPGSSRT ADHPQENQP
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