| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1292 |
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| Symbol | |
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| ID | 7382381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1348107 |
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| End bp | 1348706 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643654611 |
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| Product | TraF peptidase. Serine peptidase. MEROPS family S26C |
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| Protein accession | YP_002552757 |
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| Protein GI | 222110493 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTC ACTCCACCAC CGCGCGCACG CCCGAAGCCG CGCCGCGTCC TCGCTCGCGC
CTGCGTGCTC GCATCGTGCT GGCGGGCCTG TCCGCCTGCG GCCTGGCTGC GCTGGCCTGG
GCGTCCTTCG TGCATCCGCT GCCGCGCCTG ATCTACAACC CGTCCGACAG TGTGGCGGTC
GGCTGGTATC GCGTCGATCC GCTGGGCCAC GATACCGGCT CGCTGCCACG TCCTCTGTCC
GTGGGCAGCA TCGTTCTGAC CACGCTGCCG CCAGACGCTG CCACGCTGGC CGCGCAGCGC
GGCTACCTGC CGGCGCGCGT GCCGCTGCTC AAGCGCGTGG GCGCCGTTGC ACCGCAGGAG
GTGTGCATCA CTGGCCGCGT TGTCCGCATC GACGGCGTGC CTTCGGCCGC CGTGCTGCCT
GCTGACCGCT GGGGCCGGCC GCTGCCATCC TGGCAGCAAT GCCGCCGCCT CGAACCCGCC
GAACTGTTCC TCTTGAGTGT GACCAACCCG GCGTCGTTCG ACAGCCGGTA TTTCGGGCCG
GTCAGCACAT ACGCCGTGAT CGGCGTCGCA CATCCGGTCT GGCTGGGATC CCGCCCATGA
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| Protein sequence | MTAHSTTART PEAAPRPRSR LRARIVLAGL SACGLAALAW ASFVHPLPRL IYNPSDSVAV
GWYRVDPLGH DTGSLPRPLS VGSIVLTTLP PDAATLAAQR GYLPARVPLL KRVGAVAPQE
VCITGRVVRI DGVPSAAVLP ADRWGRPLPS WQQCRRLEPA ELFLLSVTNP ASFDSRYFGP
VSTYAVIGVA HPVWLGSRP
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