Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1230 |
Symbol | |
ID | 7383132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1291782 |
End bp | 1293146 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643654549 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_002552697 |
Protein GI | 222110433 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.718345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGA CTGTCGTTGC CTTCATCGTT GCGTTGGGCG TGCTGATCGC CGTGCACGAG TACGGCCATT ACCGCGTGGC GGTGGCCTGC GGTGTCAAGG TCCTCCGCTT CTCGGTCGGC TTTGGCAAGC CTTTGCTGCG TTGGCAGCCT AAGGGCTCAC CCACGGAATT CGTCATCGGC GCCTTTCCGC TGGGAGGGTA CGTGCGCATG CTGGACGAGC GTGAGGCGCC CGTTGAGCCG CATGAACGCC ACCTGGCCTT CAATACCCAG CCCCTGCGTT CGCGCGCCGC CATCGTTGCC GCGGGGCCGC TGGCCAATCT ACTGCTGGCG GTGCTGTTGT ATGCCGCCGT CAACTGGAGC GGCGTGGACG AGCCCAAGGC CTACCTGGCC AGCCCTGTAG CGGGGTCGGT GGCCGAGCAG GCGGGCCTGC GCGGCGGCGA ACTGGTGGTG TCCGCCGGGC TGGGCGAGGG CGATTTCGAG CCCGTGCGCT CGTTCGAAGA CCTGCGTTGG ACGCTCACGC GCGGCGCGCT GGACGGGCAG AACGTGCGGC TGCTGCTGCA GCCTGAGCGC GGCTCGACGC CGCGCGAGGT GCTGTTGCGC ATAGATCAGC TGGACGTGCG CGAGGCCGAT GTGCAGCTGT ATCGCCGCAT CGGCATCACC GCGCCCTGGA CGCGACCCGT GCTGGGCGAG GTCGTGCCAG GCGGCGCGGC TGCGCGTGCG GGGCTGCGCG CTGGTGATGT GGTTCTGCGC CTGGGCAGTG CGGCGGTGGT GGACGGCGTG CAACTGCGCG AGCTGATACG CGCGTCCGTG CAGGCGGGCC AGCCGCTCAC GCAGGTCTGG CGCATCGAGC GCGACGGTCA GCCGCGCGAC CTGGAAGTCA CGCCCGAAGT GGCACAGGAG GCGGGCGGCG CCGTGGGACG CGTCGGCGCC TATGTGGGCG CGCCGCCCGA GATGGTGAAC GTGCATTACG GCCCCTTGGA AGGGCTCTGG AAAGGCACGG TGCGCACATG GGAGGTGTCG GTCCTCACGC TGCGCATGAT GGGCCGCATG GTGATCGGTG AGGCTTCGCT CAAGAACCTC AGCGGGCCGC TGACCATCGC CGATTACGCA GGCCGTTCCG CCAGCATGGG GCTGACCCAG TACCTCAGCT TCCTCGCACT CATCAGCGTG AGCCTGGGAG TGCTGAACCT GCTTCCGCTG CCCGTATTGG ATGGTGGGCA CCTGATGTAT TATCTTTGGG AGGGGGTGAC GGGACGGGGC GTGTCCGAAG CCTGGATGGA GCGGCTGCAG CGCACAGGCG TCGCGGTGCT TCTCCTCATG ATGTCCATCG CCCTGTTCAA CGACCTCACC CGGCTTTTTG GCTAA
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Protein sequence | MLLTVVAFIV ALGVLIAVHE YGHYRVAVAC GVKVLRFSVG FGKPLLRWQP KGSPTEFVIG AFPLGGYVRM LDEREAPVEP HERHLAFNTQ PLRSRAAIVA AGPLANLLLA VLLYAAVNWS GVDEPKAYLA SPVAGSVAEQ AGLRGGELVV SAGLGEGDFE PVRSFEDLRW TLTRGALDGQ NVRLLLQPER GSTPREVLLR IDQLDVREAD VQLYRRIGIT APWTRPVLGE VVPGGAAARA GLRAGDVVLR LGSAAVVDGV QLRELIRASV QAGQPLTQVW RIERDGQPRD LEVTPEVAQE AGGAVGRVGA YVGAPPEMVN VHYGPLEGLW KGTVRTWEVS VLTLRMMGRM VIGEASLKNL SGPLTIADYA GRSASMGLTQ YLSFLALISV SLGVLNLLPL PVLDGGHLMY YLWEGVTGRG VSEAWMERLQ RTGVAVLLLM MSIALFNDLT RLFG
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