Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1142 |
Symbol | |
ID | 7384574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1199007 |
End bp | 1202153 |
Gene Length | 3147 bp |
Protein Length | 1048 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643654463 |
Product | heavy metal efflux pump, CzcA family |
Protein accession | YP_002552615 |
Protein GI | 222110351 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0325102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCAAGT GGCTTCTCGA AAATAGCTTA CGAAACCGGC TCCTGGTCAT CATCGGGGCG CTGGTGCTGA TGGCGTATGG CGCGTTCACC CTGACGCGCA CGCCGGTAGA TGTCTTTCCC GATCTCAACA AGCCGACCGT CACTCTCATG ACGGAGGCTG GCGGCATGGC TGCCGAAGAA GTCGAGCAAC TCATCACGTT CCCGCTCGAA ACGGCCATGA ACGGCCTGCC CAGCGTCGAA AGCGTGCGCT CGGTCTCCAG CGCCGGGCTT TCCTTCATCT ACGTGACATT TGACTGGAAG ACCGACATCT TCCGGGCGCG CCAGATGGTC TCCGAACGCC TGACGTCCAT GGAGGAAGGG CTAGCCCCGG GCGTGACGCC CACTATGGGG CCAATCAGCT CAGTGATGGG CGAGATCATG CAGATTGCAA TCCCCATCGG TGCCAAGCCC TCAGGGCAGA AGAACGCAGC CCCGCCGCTG TCGGCCATGG ACACTCGCGA GTACGCGGAC TGGGTGCTAC GCCCCCGGCT GATGGCCATA CCTGGTGTTG CCCAAGTCAT CCCGATCGGA GGCGAGGTCC GTCAGTTCCA GGTCCAGCCC AACACCACGC GAATGTCAGA GCTGGGCGTG ACTGCGTCCG ATCTGGATGC GGCTCTCAAG GGCTTCTCCG CGAACACTTC CGGCGGCTTC CTGGAGATCA ATGGCCGCGA GTACCTGATC CGCAACCTGG GCCGCACGTC CCGACTCGAC GACCTGCGTA ACCTGCCTCT CGCGGTGCGT GCGGGCCAAC CCATCCTGCT CCACCAGGTC GCCGATGTTC AGTTTGCGCC AGCCATCAAG CGCGGCGATG CGGGCTTCGA GGGCCTGCCA GCCGTGATCC TGGGCATCCA AAAGCAGCCC ACGGCCGATA CGATTGCACT GACCCGCTCG ATCGAGTCAG CGTTGGCGGA CATGAAGGGC TCACTGCCGG CTGGCATGGC CGAGCCACAG GTGACCTTCC GACAAGCCAA CTTCATCGAG GCGTCCATCA GCACGCTGCA AGGCAAGCTC ATCGGCGCAT CGGTCTTCGT GGCGGTGATC CTGTTCTTCT TCCTGGGCAC TTTGCGCCCC CTGGTGATCG CGTTGACCGC GATTCCTGCC TCGATCTTCG TGACCGGGCT GGTGTTCCAC TATTTCGGCC TATCAATCAA CACCATGACG CTCGGTGGGC TGGCGATCGC CATCGGCGGT CTCGTGGACG ATGCTGTGGT CGATGTGGAG AACATCATGC GGCGGCTCAA GGAGGACCGC ACCCGCCACC CTGAGAACCG GCTGACGCCC CTGGTCATCG TTGCCAGGGC CTCGATGGAG GTTCGCTCGG CGATTCTCTA CGCCACGATG ATCATTGTGC TGGTGTTCCT GCCCCTGTTC GCGCTGCCGG GGATGGAGGG GCGCTTGTTC GTGCCGCTGG GCATCGCCTT CATCGTCTCC ACGCTGGCCT CGCTGCTGGT CTCTGTGACG GTCACTCCGG TGCTTTCGTA CTACCTGCTG CCCAAGATGA GGACGCTGGA CCATGGCGAC ACTCGGCTTC TAGCCTGGTT GAAGACGCGC TATCAGGGCG GCCTGCAGCG GGTCTTGCAG CGGCCGCGTG CCGCCCTTGG CATGGCCGCT GTGGCTGTCA CACTGGCTGT CGCCGCGGTG CCATTCTTCC CGACCACGTT CCTGCCCCCG TTCAATGAAG GAACGTTGCT GGTGGGCCTG CGCCTGAATC CCGGTGTGAC GCTGGCCGAA TCTTCGGCGC TTGCCCAGCA AGCCGAGCTG CTGGTCGCGC AGGTGCCAGA GGTGCAGCAC GTGGGCCGGC GCAGCGGACG GGCCGAGCTG GACGAGCATG CCGAAGGCGT GCATGTCAGC GAGCTGGACG TGGGCCTGCT GCCCGCCTCG GAGCTAAAGC GCTCCATGGA GGAGATCACC GCCGACATCC GTTCGCGTCT GGCTCACTTG CCCGGCTCCA TCGGCATTGG CCAGCCGATC TCGCACCGCA TCGACCACAT GTTGTCGGGG GTGCGCTCGC AGATCGCCAT CAAGGTGTTC GGCGAGGACC TGGACGTCCT GCGCGGGCAG GCGGATCTGC TGCGCGCCAA GCTGGCCGGA ATTCCGGGGC TTGCTGACCT GGAGATCGAA AAGCAGGTCC TAGCGCCGCA GATCAAAATC CGCGTGGATT ATGCGGCGGC GGGACGCTAC GGCGTGGCCG CACCGCAAAT TCTGTCCACG CTGCAAAGCC TGGTCGAAGG CGAAAAGATC ACCGAGGTCA TCGAGGGCAA CCGCCGCTTC GCGCTGGTGG TTCGCCTGCC CGAGCAGGCG CGGTCGATTG AGGGCTTGAG CCGCATCCTC ATCGACACGC CCATGGGTCG GGTCCCGTTG TCGCGCCTTG CCACCATCGA AGACAGCGAC GGCCCCAACC AGGTCAGCCG CGACGATGGC CGTCGACGCA TAGTTTTGTC GGCCAACGCT CAGGGACGGC CGCTGTCCGA AGTAGTGGCC GACATACGCA GCGTCGTCCA AGAAGTGCGC TTGCCCGAAG GCTACTTCAT CACGCTGGGC GGCCAGTTCC AGGCACAAGA GGAAGCCTCG CGACTGGTGG GCCTGCTGTC CATCGTCTCC CTGACGCTCA TGTTCGTGGT GTTGTACACG CGCTACAAGT CGGTCGTCCT ATCAGCGCTC ATCATGGTGA ACATTCCATT GGCCCTGGTC GGCGCCGTGT TGGGGCTGTG GCTGTCTGGC CAGCCGTTGT CCGTGGCCGC CCTGGTCGGC TTCATCACGC TCGCGGGTAT TTCTGTGCGC AACGGCATCC TGAAGGTGAG CCACTACCTC AACCTCATGC GCATGGAGGG CGAGGACTTC GACCAGAAGA TGATCGTGCG TGGCTCGCTC GAACGGCTTT CCCCGGTTCT GATGACCGCG CTGGTCACGG CCTTCGCGCT GGCCCCGCTG CTGTTCGAGG CGTCCCGACC CGGTACTGAG ATCCTGCACC CCGTCGCGGT GGTGATCTTC TCGGGGCTGG TCAGCTCCAC GCTGCTAGAC ACCTTCCTTA CACCCGCCAT GTTCTGGCTG TTCGGCCGCA AGCCTGCCGA ACGCCTGCTG GACGACCGCG ACGCGGAGGC ATTCTGA
|
Protein sequence | MFKWLLENSL RNRLLVIIGA LVLMAYGAFT LTRTPVDVFP DLNKPTVTLM TEAGGMAAEE VEQLITFPLE TAMNGLPSVE SVRSVSSAGL SFIYVTFDWK TDIFRARQMV SERLTSMEEG LAPGVTPTMG PISSVMGEIM QIAIPIGAKP SGQKNAAPPL SAMDTREYAD WVLRPRLMAI PGVAQVIPIG GEVRQFQVQP NTTRMSELGV TASDLDAALK GFSANTSGGF LEINGREYLI RNLGRTSRLD DLRNLPLAVR AGQPILLHQV ADVQFAPAIK RGDAGFEGLP AVILGIQKQP TADTIALTRS IESALADMKG SLPAGMAEPQ VTFRQANFIE ASISTLQGKL IGASVFVAVI LFFFLGTLRP LVIALTAIPA SIFVTGLVFH YFGLSINTMT LGGLAIAIGG LVDDAVVDVE NIMRRLKEDR TRHPENRLTP LVIVARASME VRSAILYATM IIVLVFLPLF ALPGMEGRLF VPLGIAFIVS TLASLLVSVT VTPVLSYYLL PKMRTLDHGD TRLLAWLKTR YQGGLQRVLQ RPRAALGMAA VAVTLAVAAV PFFPTTFLPP FNEGTLLVGL RLNPGVTLAE SSALAQQAEL LVAQVPEVQH VGRRSGRAEL DEHAEGVHVS ELDVGLLPAS ELKRSMEEIT ADIRSRLAHL PGSIGIGQPI SHRIDHMLSG VRSQIAIKVF GEDLDVLRGQ ADLLRAKLAG IPGLADLEIE KQVLAPQIKI RVDYAAAGRY GVAAPQILST LQSLVEGEKI TEVIEGNRRF ALVVRLPEQA RSIEGLSRIL IDTPMGRVPL SRLATIEDSD GPNQVSRDDG RRRIVLSANA QGRPLSEVVA DIRSVVQEVR LPEGYFITLG GQFQAQEEAS RLVGLLSIVS LTLMFVVLYT RYKSVVLSAL IMVNIPLALV GAVLGLWLSG QPLSVAALVG FITLAGISVR NGILKVSHYL NLMRMEGEDF DQKMIVRGSL ERLSPVLMTA LVTAFALAPL LFEASRPGTE ILHPVAVVIF SGLVSSTLLD TFLTPAMFWL FGRKPAERLL DDRDAEAF
|
| |