Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1128 |
Symbol | clpP |
ID | 7384557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1185186 |
End bp | 1185794 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643654450 |
Product | ATP-dependent Clp protease proteolytic subunit |
Protein accession | YP_002552605 |
Protein GI | 222110341 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.332941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCAT TGGAAACGCA AGCCCTGGGC ATGATCCCCA TGGTCATTGA GCAGTCCGGC CGCGGCGAGC GGTCCTACGA CATTTATTCG CGCCTGTTGA AGGAGCGCGT GATCTTCCTG GTGGGTGAGG TCAATGACCA GACCGCCAAC CTGGTGGTTG CGCAGCTGCT GTTCCTTGAG AGCGAGAACC CGGACAAGGA TATTTCGTTC TACATCAACT CCCCGGGGGG GAGCGTGACG GCGGGCATGG CCATCTATGA CACCATGCAG TTCATCAAGC CGGATGTGTC CACGCTGTGC TGCGGCTTTG CGGCGAGCAT GGGGGCTTTC CTGCTGGCTG CAGGCGCCAA GGGCAAGCGC TATTCGCTGC CCAACTCCAA GATCATGATC CACCAGGTGC TGGGCGGCGC CCGCGGACAG GCGACGGATA TCGAGATCCA CGCCCGCGAC ATTTTGCGTA CCAAAGATCA GATGAACCGC ATCCTGGCGG AGCGCACGGG ACAGCCCATT GAGAAGGTGA AGGCGGATAC CGAGCGGGAC TATTTCATGA CCGCGGACGA AGCCAAGGAT TACGGCATCG TGGACCAGGT CATCGCCAAG CGCCCCTGA
|
Protein sequence | MSALETQALG MIPMVIEQSG RGERSYDIYS RLLKERVIFL VGEVNDQTAN LVVAQLLFLE SENPDKDISF YINSPGGSVT AGMAIYDTMQ FIKPDVSTLC CGFAASMGAF LLAAGAKGKR YSLPNSKIMI HQVLGGARGQ ATDIEIHARD ILRTKDQMNR ILAERTGQPI EKVKADTERD YFMTADEAKD YGIVDQVIAK RP
|
| |