Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1088 |
Symbol | |
ID | 7382897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1135820 |
End bp | 1136647 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643654403 |
Product | type IV pilus biogenesis/stability protein PilW |
Protein accession | YP_002552565 |
Protein GI | 222110301 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.756407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAGT GGCGGATCAA TCATGGCGGG TGGCAGGCGA TGGCGGCGAT CGGCATTGCC GTTGTCGTCT CGGGCCTTGC CGGTTGTGCC CACCAAGGGG CGTCCGATGC CAATGGTGCC GTGGCGGAAT CCGCGTCCGG CGGCGGCGAA GCCGACGTGC GTCGCCGTGC ACGTATCCGG CTGGAGCTGG CTGCGAACTA CCTGCAAATG GGGCAGACCA CCGTGGCCAT GGAGGAGGTG CGGCAGGCGA TCACGACCGA TCCCACGTAT GCCGACGCCT ACCACCTTCG CGGCTTGATA TACATGAATA TGGGCGACCT GGCGCTCGCG GAAGACAGCC TCAAGCGCGC CCAAGGCATG AAGCCTTCCG ATCCAGACAT CATGCACAAC TATGGCTGGC TGCAGTGCCA GCGCCAGCAG TACGACGTCG CCAATCAGAT GTTCGAGCGG GCGCTTGCCG TGCCGAGTTA CAAGGCACGC AGCAAGACGC TGATGTCCCA GGGCCTGTGC TACCAGCGGG CGGGGCGTCT TGCAGAGGCC GAACAAGCGC TGAAGCAGGC CTATGAGATT GATGCGGGCA ACCCGGCGGT GGGGTACCAC TTGGCGGCCG TGCTGTTTGC GCGGGGCGAG GCCAAGCGGG CGCAGTTTTA TGTCCGTCGC GTGAACAATG GCGAGTATGC CAATGCCGAG TCTCTGTGGT TGGGCGTGAA GATCGAACGC GTGCTCAAGG AGTTCGTGGC CATGCGCCAG TTGGGTGATC AATTGCGCAA GCGCTTCCCC AACGCAAAAG AAACCCTGGC ATTCGAACGA GGGGCCTTCG ATGAGTGA
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Protein sequence | MAKWRINHGG WQAMAAIGIA VVVSGLAGCA HQGASDANGA VAESASGGGE ADVRRRARIR LELAANYLQM GQTTVAMEEV RQAITTDPTY ADAYHLRGLI YMNMGDLALA EDSLKRAQGM KPSDPDIMHN YGWLQCQRQQ YDVANQMFER ALAVPSYKAR SKTLMSQGLC YQRAGRLAEA EQALKQAYEI DAGNPAVGYH LAAVLFARGE AKRAQFYVRR VNNGEYANAE SLWLGVKIER VLKEFVAMRQ LGDQLRKRFP NAKETLAFER GAFDE
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