| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0929 |
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| Symbol | |
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| ID | 7384432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 950930 |
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| End bp | 951832 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654244 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002552407 |
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| Protein GI | 222110143 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.316405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGC GCCTGGGATA CCGTATGCGT AACAGCCTTT TGGGGCTTTT GCGCACGGCT
GGCATGTGCT GCGCGCTCCT TTTTTTGCAG CAAACCGCGC ATGCGGACCT GTGGGCCTTC
GTGGACGAGC GCGGCGTGAC GCATTTCGCC GCGCAGCAGC TGGACGAGCG TTACGCGCTG
TTCTTTCGCG GCAACGACTT CGACTCCGAG CGCGACGGCT CCAACACCGG ACGTCAGGGT
GCGGCCGATG TCTCCACCGG GCCGGCCAGT CCCTCGGGGG CGCGGCTGCT GGCCTTCTTC
GAGGTGTCGC ACGACTACAA GCTCGTGCGC CAGCACCTGC GCTCGGCGTC GGCGCGCCAT
GGCGTGGACT ACGCGCTGCT GCAGGCGGTG ATCGCCACCG AGTCGGGTTT CAACACCCGT
GCGGTTTCAC CGCGCGGCGC CGTGGGGCTG ATGCAGCTCA TGCCCGCCAC CGCCAGCCGC
TTCGGCGTGA GCGGCGACAC CAGGCGCTCG GTGGAGCAAA AGCTGGTGGA CCCCGCCACC
AACGTGGCCG CGGGCACGCG CTACCTGCGC TACCTCATGG ATCTTTTCGA GGGCCGCCTG
GACTTGGCGC TGGCAGCCTA CAACGCGGGC GAGGGTGCCG TGCAGCGCGC CGGCAACCGC
GTGCCCGCCT ACCGCGAGAC GCGCAACTAC GTACAGAGCG TGATGGGCCT GTATGCGCTG
CTCAAGCCGC CGCTACCGAC GCGCAATCAG CGCGCGAACC CGGGGCGCGT GCGCATGGAA
CTGCCCGCCA CGCCCCATTC ACTATCCGAT GCCGGTGAGC GCGCCGACAC GCAGCGCATG
TCCACGCCTG CGCCCACGCG CCTGGCCCGG CAGTCATCGA CCGAGTCTGT CTTCACTGAA
TGA
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| Protein sequence | MTARLGYRMR NSLLGLLRTA GMCCALLFLQ QTAHADLWAF VDERGVTHFA AQQLDERYAL
FFRGNDFDSE RDGSNTGRQG AADVSTGPAS PSGARLLAFF EVSHDYKLVR QHLRSASARH
GVDYALLQAV IATESGFNTR AVSPRGAVGL MQLMPATASR FGVSGDTRRS VEQKLVDPAT
NVAAGTRYLR YLMDLFEGRL DLALAAYNAG EGAVQRAGNR VPAYRETRNY VQSVMGLYAL
LKPPLPTRNQ RANPGRVRME LPATPHSLSD AGERADTQRM STPAPTRLAR QSSTESVFTE
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