Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0868 |
Symbol | |
ID | 7383565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 891850 |
End bp | 894033 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643654182 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_002552346 |
Protein GI | 222110082 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.185625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTT TTAACAAGGT TACCAAGTCG TTCCAGTGGG GTGACAAGAC CGTTGTCATG GAAACGGGTG AGATCGCCCG GCAGGCCTCA GGCGCCGTGC TGGTGAACAT TGACGACACC GTGGTGCTCG CTACCGTGGT GGGGTCCAAG CAGGCCAAGC CTGGCCAGGA CTTCTTCCCG CTGACGGTGG ACTACATCGA GAAGACCTAC GCCGCCGGCA AGATCCCCGG CAGCTTCTTC AAGCGCGAGG CCAAGCCCAG CGAGTTGGAG ACGCTGACCA GCCGCCTGAT CGATCGCCCC ATCCGCCCGC TGTTCCCCGA GGGCTTCTAC AACGAGGTGC ATGTGGTCAT CCACACCATC TCGCTGAACC CCGAAGTGGA CGCTGACATC GCCGCCATGA TCGCCGTGAG CGCAGCGCTG TCCGTTTCCG GTATTCCGTT CAATGGCCCC ATCGGCGCCG CACGCGTGGG CTACGTCAAT GGCGAATACG TGCTGAACCC CGGGCAGACC GCGCGCAAGA GCTCGCAGCT GGACCTGGTG GTGGCGGGCA CCGAGGCCGC TGTGCTGATG GTGGAGTCCG AAGCGCAGCA GTTGTCCGAA GAGATCATGC TGGGCGCCGT GGTGTTCGGC CACGAGCAGG GCAAGGTGGC GATCAACGCC ATCCATGAGC TGGTGCGCGA CGCTGGCAAG CCCGTGTGGG ACTGGCAGCC GCCTGCCAAG GACGAGACTT TCATCGCCAA GGTCACGGCC CTGGCAGAGG ACAAGCTGCG CGCGGCTTAC CAGATCCGCA GCAAGCAGGC CCGCACCCAG GCCTTGCGCG AGGCATCGGC CTCGGTGCTG GAATCGCTGA AGGGCGAGGG CGTGGAGTTC GACGCCGTGA AGGTCGAGGC CCTGCTGTTC GACATCGAAG CCAAGATCGT GCGCAGCCAG ATCCTGGCCG GCGAGCCCCG CATCGACGGC CGCGACACGC GCACCGTGCG CCCCATCGAG ATCCGCAACT CCGTGCTGCC CCGCACCCAC GGCTCCGCCC TGTTCACGCG TGGCGAGACC CAGGCGCTGG TGGTGTCCAC GCTGGGCACC GAGCGCGATG CGCAGCGCAT CGACGCACTG GCCGGCGAGT TCGAAGACCG TTTCATCTTC CACTACAACA TGCCTCCCTT CGCCACGGGT GAAGTGGGCC GCATGGGCTC GACCAAGCGC CGCGAAATCG GCCACGGCCG TCTGGCCAAG CGCGCCCTGG TGGCCTGCCT GCCGAGCAAG GACGAGTTCC CCTACACCAT CCGCGTGGTG TCGGAGATCA CCGAATCCAA CGGCTCCTCG TCCATGGCAT CGGTCTGCGG CGGCTGCCTG TCGCTGATGG ATGCCGGCGT GCCCATGAAG GCGCACGTGG CCGGTATCGC CATGGGCTTG ATCAAGGAAG ACAACCGCTT CGCCGTGCTG ACCGACATCC TGGGCGATGA GGACCACCTG GGCGACATGG ACTTCAAGGT GGCCGGTACG ACCAACGGCA TCACCGCCCT GCAGATGGAC ATCAAGATCC AGGGCATCAC CAAGGAAATC ATGCAGGTCG CCCTGGCGCA GGCCAAGGAA GCACGTATGC ACATCCTGGG CAAGATGCAG GAAGCCATGG GTGAAGCCAA GACCGAGATC TCATCCTTCG CGCCCAAGCT CTACACGATG AAGATCAACC CCGAGAAGAT CCGCGACGTG ATCGGCAAGG GCGGCGCCAC GATCCGTGCC CTGACGGACG AGACCGGCTG CCAGATCAAC ATCGAGGAAG ACGGCACCAT CACCATCGCA GCCACCGAGG CTGCCAAGGC TGATGAAGCC AAGCGCCGCA TCGAAGAGAT CACGGCCGAG GTTGAAGTGG GCAAGGTCTA CGAAGGCCCG GTCACCAAGA TCCTGGACTT CGGCGCGTTG ATCAACCTGC TGCCCGGCAA GGACGGCCTG CTGCACATCA GCCAGATCGC CCACGAGCGT GTGGAAAAGG TGGGCGACTA CCTGCAGGAA GGTCAGGTCG TGAAGGTCAA GGTGCTGGAG ACCGACGACA AGGGCCGCGT CAAGCTGTCC ATGAAGGCGC TGGCTGACCG CCCCGCTGGC GACAGCGGCC GTCCCGCCCC TGCGGAGCGG GGCGAGCGTC GTGAGCGCCG TGATGGCGGT GCTTCCGAGC AACAGCAGCA GTAA
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Protein sequence | MSIFNKVTKS FQWGDKTVVM ETGEIARQAS GAVLVNIDDT VVLATVVGSK QAKPGQDFFP LTVDYIEKTY AAGKIPGSFF KREAKPSELE TLTSRLIDRP IRPLFPEGFY NEVHVVIHTI SLNPEVDADI AAMIAVSAAL SVSGIPFNGP IGAARVGYVN GEYVLNPGQT ARKSSQLDLV VAGTEAAVLM VESEAQQLSE EIMLGAVVFG HEQGKVAINA IHELVRDAGK PVWDWQPPAK DETFIAKVTA LAEDKLRAAY QIRSKQARTQ ALREASASVL ESLKGEGVEF DAVKVEALLF DIEAKIVRSQ ILAGEPRIDG RDTRTVRPIE IRNSVLPRTH GSALFTRGET QALVVSTLGT ERDAQRIDAL AGEFEDRFIF HYNMPPFATG EVGRMGSTKR REIGHGRLAK RALVACLPSK DEFPYTIRVV SEITESNGSS SMASVCGGCL SLMDAGVPMK AHVAGIAMGL IKEDNRFAVL TDILGDEDHL GDMDFKVAGT TNGITALQMD IKIQGITKEI MQVALAQAKE ARMHILGKMQ EAMGEAKTEI SSFAPKLYTM KINPEKIRDV IGKGGATIRA LTDETGCQIN IEEDGTITIA ATEAAKADEA KRRIEEITAE VEVGKVYEGP VTKILDFGAL INLLPGKDGL LHISQIAHER VEKVGDYLQE GQVVKVKVLE TDDKGRVKLS MKALADRPAG DSGRPAPAER GERRERRDGG ASEQQQQ
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