| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0777 |
|---|
| Symbol | |
|---|
| ID | 7383717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 805356 |
|---|
| End bp | 806672 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643654089 |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | YP_002552256 |
|---|
| Protein GI | 222109992 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.825818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTGT CCGAAAGCCT GATCGTCATC ACCGCCCTCA TCGGGGCCAG TGCCTTCTTC
TCGCTGGCCG AGATTTCCCT TGCGGCATCG CGCCGCCTGC GGCTGCGCCA GCTGGCCGAC
GAGGGAGACC ACCGCGCCGA CCGCGTGCTG CGGCTGCAGG AAAACCCGGG CGACTATTTC
ACCGCCGTAC AGATCGGCCA GAACGCCGTG GCCGTGCTGG GCGGCATCGT GGGCGAAGGC
ACCTTGAGCC CGCACTTCTC CGGCTTCTTC GGTATGTGGC TGGGCGCCTC GCATGCGCAG
ACGGCGGGTT TCCTGCTGTC ATTCACCGTC ATCACGTCGC TGTTCATCCT GTTTGCCGAC
CTGTTCCCCA AACGCATGGG CATGGCGGAG CCCGAGCGCC TGGCGCTGCG CGTGGTGGCG
CCCATGCAGG CCACCATGGC GCTGTTGCGG CCCGTGGTAT GGCTGTACAG CCGCTGCGCG
GACCTGCTGT TCCGCGTGCT GGGCATGAAC GCGCTGCGCG ACGACCGCGT CACCTCCGAT
GACATCCTGG CCATGATGGA AGCCGGCGCG CGCGCCGGCG TGCTGGCCGC GCGCGAGCAG
CAGGTGATCG AGAACGTGTT CGAGCTGGAC ACGCGCAGCG TGGCGAGCAG CATGTCGCCG
CGCGACCGCG TGGCTTATTT CCTGCGCGAC GATCCCGACA CGGTGATCCG CGCACGCATT
GCGGCCGAGC CGTTTTCCAC CTACCCCGTG TGCGAAGGCG ACATCGACCA CGTGGTCGGC
TACGTGGACG CCAAGGACCT GTTCCAGCGC GTGCTGAACA ACCAACCCAT CTCGCTGGCC
GACGAGGGCC TGGTACGCAA GGTGCTCATC GTGCCGGACC GGCTGTCGCT GGCCGAAGTG
CTGGAGCAGT TCCGCCAGGT GCATGAGGAC TTCGCCGTCA TCGTCAACGA ATACAGCCTG
GTCGTGGGCG TGGTCACACT CAACGATGTG ATGAGCACGG TGATGGGTGA CCTGGTGGGC
CCGGCGGATG AGGAGCAGAT CGTGCGTCGC GACGAGAATT CCTGGCTCAT CGACGGCACC
ACGCCCGTGT CCGACGTGCT GCACGCCCTG GGCCTGGACG AGCTGCCGCA CGCCGATGAG
TACGAGACCC TGGCGGGCTT TCTGATGGTG ATGCTGCGCC GGGTGCCGCG CCGCACCGAC
AGCGTGACCT TCGGGGGCTA CAAGTTCGAA GTGCTGGACG TGGACAGCTA TCGCATCGAC
CAGGTGATGG TGTCAAGGCT GGAAGGCGCA CCCAAACCAG TGCTGCCCGT TGAATAA
|
|---|
| Protein sequence | MPLSESLIVI TALIGASAFF SLAEISLAAS RRLRLRQLAD EGDHRADRVL RLQENPGDYF
TAVQIGQNAV AVLGGIVGEG TLSPHFSGFF GMWLGASHAQ TAGFLLSFTV ITSLFILFAD
LFPKRMGMAE PERLALRVVA PMQATMALLR PVVWLYSRCA DLLFRVLGMN ALRDDRVTSD
DILAMMEAGA RAGVLAAREQ QVIENVFELD TRSVASSMSP RDRVAYFLRD DPDTVIRARI
AAEPFSTYPV CEGDIDHVVG YVDAKDLFQR VLNNQPISLA DEGLVRKVLI VPDRLSLAEV
LEQFRQVHED FAVIVNEYSL VVGVVTLNDV MSTVMGDLVG PADEEQIVRR DENSWLIDGT
TPVSDVLHAL GLDELPHADE YETLAGFLMV MLRRVPRRTD SVTFGGYKFE VLDVDSYRID
QVMVSRLEGA PKPVLPVE
|
|---|
| |