Gene Dtpsy_0424 details

Gene Information

• Locus tag: Dtpsy_0424
• ID: 7384011
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 433506
• End bp: 434177
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643653739
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_002551908
• Protein GI: 222109644
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCTC CCACCACGCT TTTCCTGATC GATGACCACA CCTTGCTGCG CCGCGGACTG 
GTGGCGCTGC TGTCCCAGCA GCCGGACCTG CGCGTGGTGG GCGAGGCCGG GGACGCCGCG 
GAGGCATTGC GTCTGCTGCC TGCGCTGCGC CCCGACGTGA TCCTGCTGGA CAACCACCTG 
CCCGGTGTGC GCGGCGTGGA CGCCATCGCC GGCCTGCGCG AGGCGTCGCA GGGCAGCCGC 
GTGTTGATGC TCACGGTGAG CGAAGATGGG CAGGATCTGG CGGCCGCCTT GCGCAACGGC 
GCGCAGGGGT ATTTGCTCAA GACCATTGAC GGTGACCTGC TTGCGCAGGC GATACGGCGG 
GCTGCACGCG GCGAGCCGGT GGTCAGCCCC GAAATGATGG GCAAGCTGGT GGCGGCGTTC 
CAGTCCCAGG GGGCGCCCAC GCCCGAGCCC TTGCCCGAAG AGGAAGAGCC CGCGTCGGTG 
CTGTCGCCGC GCGAAGAAGA CGTGTTGCGC GAGATTGCGC GCGGTCTCAG CAACAAGGAG 
ATCGCACGTG CGCTCGACAT TGCCGAGACC ACCGTGAAGA TCCATGTGCA GCACATTCTG 
CGCAAGCTGG GACTGTCCTC GCGCGTGCAG GCGGCGGTCT ACGCCTCGGA CCGCCACCGC 
CTCACGGAAT AA 

 

Protein sequence

MNAPTTLFLI DDHTLLRRGL VALLSQQPDL RVVGEAGDAA EALRLLPALR PDVILLDNHL 
PGVRGVDAIA GLREASQGSR VLMLTVSEDG QDLAAALRNG AQGYLLKTID GDLLAQAIRR 
AARGEPVVSP EMMGKLVAAF QSQGAPTPEP LPEEEEPASV LSPREEDVLR EIARGLSNKE 
IARALDIAET TVKIHVQHIL RKLGLSSRVQ AAVYASDRHR LTE