Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0410 |
Symbol | |
ID | 7383997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 415099 |
End bp | 416235 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643653725 |
Product | twitching motility protein |
Protein accession | YP_002551894 |
Protein GI | 222109630 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGGG ATCAGGCGAG TAAATTCATC AACGATCTGC TCAAGCTGAT GGTCAGCCGC GGGGGGAGCG ACCTTTTCAT CACGGCGGAG TTTCCGCCGG CGATCAAGGT CGACGGCAAG GTCACCAAGG TCTCTCCCCA GCCTCTGACG CCCAACCATA CGCTCACGCT GGCGCGCGCC ATCATGAGCG ACAAGCAGGT GGCCGACTTC GAGCGCACCA AGGAGTGCAA CTTTGCCATC TCGCCCGCGG GCGTGGGCCG GTTCCGCGTG AACGCCTTCG TGCAGCAGGG CCGCGTGGGC ATGGTGCTGC GGACGATTCC GCTCACGCTG CCCACCATCG ACGGCCTGGG CGTTCCGCAG GTGCTCAAGG AAGTCACCAT GACCAAGCGC GGACTGTGCA TCCTGGTCGG CGCGACGGGC TCGGGCAAGT CCACCACGCT GGCCGCCATG CTGGACTGGC GCAACGAGAA CTCCTTCGGC CACATCATCA CGGTGGAAGA CCCGGTGGAA TTCGTGCATC CGCACAAGAA CTGCGTGATC ACGCAGCGCG AGGTGGGCCT GGACACCGAC AGCTGGGAGG CGGCCCTCAA AAACACCCTG CGTCAGGCGC CGGACGTGAT CCTGATGGGC GAAATCCGCG ACCGCGAGAC CATGGAGCAC GCCGTGGCGT TTGCCGAAAC CGGCCACCTG TGCCTGGCCA CGCTGCACGC CAACAGCGCC AACCAGGCGC TGGACCGGAT CATCAACTTC TTCCCCGAGG AGCGGCGCGC CCAGTTGCTG ATGGACCTGT CGCTGAACCT CAAGGCACTG ATCTCGCAGC GCCTGATTCC CAAGCAGGAC GGCAAGGGGC GCGCGGCCGC CGTCGAGGTG ATGCTGAACA CGCCGCTGAT CGCCGACCTC ATCTTCAAGG GCGAGGTGGC CGAGATCAAG GAAATCATGA AGAAGAGCCG CAACCTGGGC ATGCAGACCT TCGACCAGGC ACTGTTCGAC CTGTTCGAGG CCAACGTGAT CAGCTATGAG GATGCCCTGC GCAACGCCGA CTCGGTGAAC GACCTGCGCC TGCAGATCAA GCTCAGCAGC CAGCGTGCCA AGACGACGGA CCTGGCCTCG GGCACCGAGC ATTTCGCCAT CGTCTGA
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Protein sequence | MERDQASKFI NDLLKLMVSR GGSDLFITAE FPPAIKVDGK VTKVSPQPLT PNHTLTLARA IMSDKQVADF ERTKECNFAI SPAGVGRFRV NAFVQQGRVG MVLRTIPLTL PTIDGLGVPQ VLKEVTMTKR GLCILVGATG SGKSTTLAAM LDWRNENSFG HIITVEDPVE FVHPHKNCVI TQREVGLDTD SWEAALKNTL RQAPDVILMG EIRDRETMEH AVAFAETGHL CLATLHANSA NQALDRIINF FPEERRAQLL MDLSLNLKAL ISQRLIPKQD GKGRAAAVEV MLNTPLIADL IFKGEVAEIK EIMKKSRNLG MQTFDQALFD LFEANVISYE DALRNADSVN DLRLQIKLSS QRAKTTDLAS GTEHFAIV
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