| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0354 |
|---|
| Symbol | |
|---|
| ID | 7385362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 363628 |
|---|
| End bp | 365364 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643653668 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002551838 |
|---|
| Protein GI | 222109574 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.496762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTCA GCAACCTCAA GGTCGGCACG CGCCTGGCCT TGTCTTTCGG CTTGGTTCTG
CTCATCACCG TGGTCATCGC GGCGGTAGGC ATATGGCGTT TGCAGGAGTT GGCAAGCGTC
ACCCATCAGC TCACCAGCAC GGACAACGAA CGGCTGCGCG CCGCCAGCAC ATGGCGGCAG
GCGATTGACC TGAACTGGGT GCGCACGCGC GCCGCCATCC TGGATGCGGA CACCTCCCAT
CTCTCGAGCT GGCAAAGCGA GATTGCCAAG ACCTCCGAAG AAGCATCCAA GGCGCAGGAG
GTGGTGGAGC GGCTGGTGAC CACCGACGAA GGACGCCGCT TGCTCGCCGA CATCGCGAAG
ACGCGCGAAG CCTATCGCGG CCCGCGGGCT GAATTGCTCA AGCGCAAGGC TGCCGGCGAG
AGTGTGGGTG AGTTGCTCGA CAGCCAACTT AAGCCGTTGG CCGACGCTTA CCTACAGTCC
ATCGTCGCCA TGGAACAGCG CCAGCGCGCG CTGTACGAAA GCACCCGCGA CAACGCTGCC
AAGCAGGCCA CGCTCAGTCG CGCCATCCTG ATGGTCGTGA CCGCAGTGGC GCTGCTGGTG
GGCGCGGGCG CCGCGATCTT GTTGAGCCGC TCCGTGACCG GGCCCCTGCA GTTGGCCGTG
CGCGGCGCAG GCTTGATCGC CGAAGGCGAC CTCACCCAGT CCATCCAAGC CCACGGCCGC
GACGAAGCCG CGGCGCTGCT GAAGGCACTG GGCCACATGC AGGGCAACCT CGCTCGCGTA
GTGGCCGGCG TGCGCGCCAA TGCGGAGAGC GTCGCGTCGG CCAGCGCGGA GATCTCGCAG
GGCAACCACG ACCTGTCCGG CCGCACCGAG AGCCAGGCCA GCGCCCTGGA AGAAACGGCC
GCCTCCATGG AGCAGTTGGG CGCCACCGTG CGCCAGAACG CCGACAACGC CCGCCAGGCC
AACCAACTCG CCATGAATGC CAGCACCGTC GCCGTGCAGG GCGGCGAGGT GGTCTCCGAG
GTGGTGGACA CCATGCGCGG CATCAATGAG TCCAGCCGCA AGATCGCCGA CATCATCGGG
GTGATCGATG GCATTGCCTT CCAGACCAAC ATCCTGGCGC TGAATGCCGC CGTGGAGGCC
GCGCGTGCCG GTGAGCAAGG CCGCGGGTTT GCCGTGGTGG CCGGCGAGGT GCGCGCGCTG
GCGCAGCGCT CGGCCGAGGC CGCCAAGGAG ATCAAGCAGC TCATCACCGC CAGCGTGGAG
CGCGTGGAGC AGGGCTCGCA GCTGGTGGAC AAGGCCGGTG CCACCATGAC CGAGGTGGTC
ACCGCCATTC GCCGCGTGAC CGACATCATG GGAGAGATCA GCGCCGCCAG CAGCGAGCAA
AGCGCGGGCG TGGCCCAGGT GGGCGAGGCC ATCACCCAGA TGGACCAGGC CACGCAGCAG
AACGCCGCGC TGGTCGAGGA GATGGCCGCC GCCGCCAGCA GCCTCAGCGG CCAGGCCCGC
GAGCTCGTCG AGGCCGTCGC CGTGTTCAAG CTGGCGAGCC ATGGCCACGC ACTCGCAACG
CCCGCCGCCA TCAGGACGCC CCAGCCATCC GCACCCGCCG TGACGCGGGC CGCGCCCCCC
GCACGCCCGG CGTCCGCGCC TGTACAACCG GCGGCACGCC AGGCCCGCCC CGTCTCCGCC
TCGCCAAAGG CTGCGCCGGC ACCTTCCGCC GACGACGGCG CCTGGGAAAG TTTCTAA
|
|---|
| Protein sequence | MHLSNLKVGT RLALSFGLVL LITVVIAAVG IWRLQELASV THQLTSTDNE RLRAASTWRQ
AIDLNWVRTR AAILDADTSH LSSWQSEIAK TSEEASKAQE VVERLVTTDE GRRLLADIAK
TREAYRGPRA ELLKRKAAGE SVGELLDSQL KPLADAYLQS IVAMEQRQRA LYESTRDNAA
KQATLSRAIL MVVTAVALLV GAGAAILLSR SVTGPLQLAV RGAGLIAEGD LTQSIQAHGR
DEAAALLKAL GHMQGNLARV VAGVRANAES VASASAEISQ GNHDLSGRTE SQASALEETA
ASMEQLGATV RQNADNARQA NQLAMNASTV AVQGGEVVSE VVDTMRGINE SSRKIADIIG
VIDGIAFQTN ILALNAAVEA ARAGEQGRGF AVVAGEVRAL AQRSAEAAKE IKQLITASVE
RVEQGSQLVD KAGATMTEVV TAIRRVTDIM GEISAASSEQ SAGVAQVGEA ITQMDQATQQ
NAALVEEMAA AASSLSGQAR ELVEAVAVFK LASHGHALAT PAAIRTPQPS APAVTRAAPP
ARPASAPVQP AARQARPVSA SPKAAPAPSA DDGAWESF
|
|---|
| |