Gene Dtpsy_0304 details

Gene Information

• Locus tag: Dtpsy_0304
• Symbol: atpC
• ID: 7383888
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 312686
• End bp: 313102
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643653617
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002551788
• Protein GI: 222109524
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.799769
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACCA TCCATGTTGA TGTGGTCAGT GCCGAAGAGT CCATCTTCTC CGGCGAGGCG 
CGCTTCGTCG CGCTGCCCGG CGAAGCGGGC GAATTGGGCA TCTATCCGCG CCACACGCCA 
CTCATCACCC GCATCAAGCC GGGTTCGGTG CGCATCGAAT TGCCTGACGG CAATGAAGAG 
TTCGTTTTCG TGGCCGGTGG CATTCTGGAA GTGCAGCCCG ACTGCGTGAC CGTGCTGTCC 
GACACCGCCA TCCGTGGCCG TGACCTGGAC GACCAGAAGG CGCAGGAAGC CAAGGCTGCG 
GCCGAGGAAG CCCTGAAGAA CGCCAAGAGC GAGATCGATC TGGCCCGCGC CCAGTCCGAG 
CTGGCCGTGA TGGCAGCGCA GATTGCCGCG CTGCGCAAGT TCCGCCAGAA GCGCTGA 

 

Protein sequence

MNTIHVDVVS AEESIFSGEA RFVALPGEAG ELGIYPRHTP LITRIKPGSV RIELPDGNEE 
FVFVAGGILE VQPDCVTVLS DTAIRGRDLD DQKAQEAKAA AEEALKNAKS EIDLARAQSE 
LAVMAAQIAA LRKFRQKR