| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0280 |
|---|
| Symbol | rplP |
|---|
| ID | 7383864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 294966 |
|---|
| End bp | 295382 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643653593 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_002551764 |
|---|
| Protein GI | 222109500 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000143066 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAC CTGCTCGCCG CAAGTTCCGT AAGGAGCAAA AAGGCCGCAA CACCGGCGTT
GCCACGCGTG GCAATTCGGT GGCTTTCGGT GACTTCGGTC TGAAGTGCAC GGACCGTGGC
CGTCTGACGG CCCGCCAGAT CGAGGCCGCA CGCCGTGCGA TCTCCCGCCA CGTCAAGCGT
GGTGGCCGTA TCTGGATCCG CGTGTTCCCC GACAAGCCGA TCTCTACCAA GCCCGCTGAA
GTGCGTATGG GTAACGGTAA GGGCAACCCC GAGTACTACG TGGCTGAGAT TCAGCCCGGC
AAGGTGGTGT TCGAGATCGT TGGCGTGCCT GAAGAACTGG CCCGTGAAGC GTTCCGCCTG
GCTGCCGCCA AGCTGCCGCT GCGCACCACG TTCGTTGCCC GTCAGATTGG CGCCTAA
|
|---|
| Protein sequence | MLQPARRKFR KEQKGRNTGV ATRGNSVAFG DFGLKCTDRG RLTARQIEAA RRAISRHVKR
GGRIWIRVFP DKPISTKPAE VRMGNGKGNP EYYVAEIQPG KVVFEIVGVP EELAREAFRL
AAAKLPLRTT FVARQIGA
|
|---|
| |