Gene Dtpsy_0274 details

Gene Information

• Locus tag: Dtpsy_0274
• Symbol: rplD
• ID: 7383858
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 291690
• End bp: 292310
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643653587
• Product: 50S ribosomal protein L4
• Protein accession: YP_002551758
• Protein GI: 222109494
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000000826226
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCTCG AACTCCTGAA TGAACAGGGC CAGGCAGCGT CCAAGGTGGA CGTGCCCGAG 
ACCGTGTTCG ACCGTCAGTA CAACGAAGAC CTGATCCATC AGATCGTCGT CGCTTACCAG 
GCTAACGCCC GTCAAGGCAC GCGCGCCCAG AAGGACCGCG AGCAGGTCAA GCACTCGACC 
AAGAAGCCTT TCAAGCAAAA GGGTACTGGC AATGCACGTG CCGGTATGAC CTCCTCGCCT 
CTGTGGCGTG GGGGCGGTCG CATCTTCCCG AACCTGCCTG AAGAAAACTT CTCGCAGAAG 
ATCAACAAGA AGATGTACCG CGCTGGCATG GCTTCCATCC TGTCGCAGCT GGCCCGTGAA 
GGCCGTCTGG CTGTGGTGGA CTCCCTGAAG CTTGATACGC CCAAGACCAA GGTCCTGGCC 
GACAAGTTCA AGGCCATGAA CCTGCAATCG GTGATGGTGA TCGCCGATGA AGTGGACGAA 
AACCTGTACC TGGCATCCCG TAATCTGAAG AACGTGTTCG TGACCGAGCC GCGTTATGCA 
GATCCCGTGT CGCTGGTGCA CTACAAGAAA GTGCTCGTCA CCAAGGGCGC GATCGACAAA 
CTCAAGGAGA TGTTCGCATG A 

 

Protein sequence

MQLELLNEQG QAASKVDVPE TVFDRQYNED LIHQIVVAYQ ANARQGTRAQ KDREQVKHST 
KKPFKQKGTG NARAGMTSSP LWRGGGRIFP NLPEENFSQK INKKMYRAGM ASILSQLARE 
GRLAVVDSLK LDTPKTKVLA DKFKAMNLQS VMVIADEVDE NLYLASRNLK NVFVTEPRYA 
DPVSLVHYKK VLVTKGAIDK LKEMFA