| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0252 |
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| Symbol | |
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| ID | 7383836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 270065 |
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| End bp | 270997 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643653565 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002551736 |
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| Protein GI | 222109472 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.555837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGC ATGAACCACC CGAAAGCGCG CTCTATCGCA CCCTGCTCGA ATCCACGCGC
GCCATTCCGT GGAAGATCGA CTGGGCCACG GCGACCTTTG CCTACATCGG CCCGCAGATC
GAGGACCTGC TGGGCTGGGC GCCCACCAGC TGGCGCACCG TGCAGGATTG GGCCGACCGC
ATGCACCCCG ACGACCGGGA CCGGGTGGTC AACTTCTGCA TTTCGCAATC CCAGTCGGGC
GTGGACCACG AGGCGGACTA CCGCGCGCTC ACCACAGGCG GGGATTACGT GTGGATCCGC
GACGTGGTGC ATGTGGTGCG CGACTTGCAG GGCAATGTGG TGTCGCTCGT GGGCTTCATG
TTCGACATCA CCGAGCGCAA GCAGAACGAA CACCAGCTGC TGCAACTGCA GCAGGAGCTG
CAGGAGTTGT CATTCCGCGA CGGGCTCACG GGTGTGAACA ACCGCCGCAA GTTCGACGCG
GTGTACGAGC GCGAATGGCA GGAGGCGCAG CGCACCGGCG AGCCGCTGTC GCTGCTGATG
TTCGACGTGG ATTTCTTCAA GAGCTACAAC GACCAGTACG GCCACGTGGA GGGCGACGAG
TGCCTGCGGC GCGTGGCCCG CGCGCTGCAG CAGGCCGCCC ACCGCCCGCG CGACTGCCTG
GCGCGCTACG GGGGCGAGGA GTTCGTGCTG CTGCTGCCCG GCGCGGATGC ATCTTCCGCG
CGCGCGGTGG CGCAGCGCTG CATGCAGGAG GTGGCCCACG CCGGTATCGT CCATGCGGCT
TCGCCCTTGG GCCAGCAGCT CACGGTGAGC GTGGGCATGG GCACGGCCCT GCCCGGCACG
CAGGATGACT CCAAGCGGTT CCTGGAAACG GTGGACCGTT GCCTTTACCG CGCCAAGCAT
GCGGGGCGCA ACCGCATCGA GGCCACGGCC TGA
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| Protein sequence | MTPHEPPESA LYRTLLESTR AIPWKIDWAT ATFAYIGPQI EDLLGWAPTS WRTVQDWADR
MHPDDRDRVV NFCISQSQSG VDHEADYRAL TTGGDYVWIR DVVHVVRDLQ GNVVSLVGFM
FDITERKQNE HQLLQLQQEL QELSFRDGLT GVNNRRKFDA VYEREWQEAQ RTGEPLSLLM
FDVDFFKSYN DQYGHVEGDE CLRRVARALQ QAAHRPRDCL ARYGGEEFVL LLPGADASSA
RAVAQRCMQE VAHAGIVHAA SPLGQQLTVS VGMGTALPGT QDDSKRFLET VDRCLYRAKH
AGRNRIEATA
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