| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0227 |
|---|
| Symbol | |
|---|
| ID | 7383491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 246585 |
|---|
| End bp | 247388 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643653540 |
|---|
| Product | exodeoxyribonuclease III Xth |
|---|
| Protein accession | YP_002551711 |
|---|
| Protein GI | 222109447 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTCAAAT TAACCAGTCT CAACCTCAAC GGCATCCGCT CGGCCACGTC CAAAGGGGTC
GAGGCATGGA TTGCCCAAAG CCGGCCGGAT TGTATTTGCG TACAGGAAAT CAAGGCCCAG
TCTGCGGACA TGCAGGGGCG TTTCGAGGAA CTGGCCGGCC TGAAGGGCTA CTTCCATTTT
GCGGTGAAGA AGGGCTACTC CGGCGTGGGC ATCTATGCGC GCCACGAGCC CAGCGACGTG
GTCATCGGCT ACGGCTCCAG CGAGTTCGAC ACCGAGGGGC GCTATGTGGA ACTGCGCTTT
GACACGCCCG CGCGGCGCCT GTCCATCATC AGCGCCTACT TCCCCAGCGG GTCCTCGGGG
GAGGAGCGCC AGTTGGCCAA GTTCCGCTTC CTGGAGGAAT TCCATCCGCA CCTCATGCGG
CTGAAGGCCG AGCGGGAATT CATCCTGTGC GGCGACATCA ACATTGCCCA CCAGCAGATC
GACCTGAAGA ACTGGCGCAG CAACCAGAAG AACAGCGGCT TTTTGCCCGA GGAGCGTGCT
TGGATGACAA AGTTGTTGCA CATCTCTGAC CCGACGGGCG GGCTGGTGGA CGTTTACCGT
CAGTTACAAC CGGAGGCCAC GGACGCTTGC TACACGTGGT GGAGCAACCG CGGCCAAGCC
TATGCCAACA ACGTGGGGTG GCGCCTGGAC TACCACCTGG CGACGCCCGC CATCGCGGCG
CTTGCGCGTA CCGAGGAAAT CTACAAGGCG CAAAAGTTCA GCGACCACGC GCCCATCACC
GTGGGGTACG AGTTGTCGCT CTGA
|
|---|
| Protein sequence | MFKLTSLNLN GIRSATSKGV EAWIAQSRPD CICVQEIKAQ SADMQGRFEE LAGLKGYFHF
AVKKGYSGVG IYARHEPSDV VIGYGSSEFD TEGRYVELRF DTPARRLSII SAYFPSGSSG
EERQLAKFRF LEEFHPHLMR LKAEREFILC GDINIAHQQI DLKNWRSNQK NSGFLPEERA
WMTKLLHISD PTGGLVDVYR QLQPEATDAC YTWWSNRGQA YANNVGWRLD YHLATPAIAA
LARTEEIYKA QKFSDHAPIT VGYELSL
|
|---|
| |