Gene Dtox_4339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4339 
Symbol 
ID8431358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4514331 
End bp4515602 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content42% 
IMG OID645036532 
Productseryl-tRNA synthetase 
Protein accessionYP_003193625 
Protein GI258517403 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.619806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACT TAAAATTTGT GCGCAATAAC CCGGAAACAG TTAAAGAGGC CCTGGCCAAG 
AGGGGAAATA GAGGCAGTCT GGATGAATTT TTAAAGCTGG ATGAACAGAG ACGAGAAAAA
CTGGTAGTTG TTGAACAGTT AAAAAATCGC CGCAATACTG TATCCCAGGA AGTCGGCAGG
CTAAAAAAAG AAGGCCAACC GGCTGAGCAA ATAGTACTGG AAATGAGACA GGTTTCTCAG
GAAATTAAAG ATTTAGATGA TCAGCTAAGA GTAATAGAAG AAGAGTTGCA AGCAATTCTA
TTAGGTATTC CCAATATCCC GGATGTTTCT GTGCCGGTTG GTAAAAGCGA AACTGACAAT
ATTGAAATAA GGCTCTGGGG TGAGCCTACC AAATTTGATT TTGAACCTAA GGCTCATTGG
GATATAGGAG AAGGTCTGGA TATTATTGAT TTTGAAAGAG GAGCCAAGGT TACCGGAGCC
AGATTTTCTT TTTATAAGGG TTTGGGGGCT CGTTTGGAGA GAGCATTAAT TAATTTCATG
CTGGATTTGC ACACCTCCCA GCATAACTAT GTCGAAATAT TTCCCCCGTT TATTGCCAAT
CAGGATAGTA TGCAGGGTAC AGGCCAATTG CCGAAGTTTG CAGAAGATAT GTTTAAGTTA
GAGAATACAA ACTATTATTT AATACCGACA GCGGAAGTGC CGGTAACAAA TTTATATAGG
GAAGAAATAC TGGATGGTGA AAAACTGCCC ATTTGCCATG TTGCTTACAG CGCTTGTTTT
AGGGCGGAGG CTGGAGCCGC CGGGCGTGAT ACCAGAGGCT TAATTCGCCA GCATCAATTT
AATAAAGTGG AAATGGTAAA GTTTTGCCAC CCTGATACTT CCTTTGAGGA GTTAGATAAA
CTTGTGCTTA ATGCGGAAAA GGTACTTCAG TTGTTGGAAT TACCTTATCG CCTGATTATC
CTGTGTACGG GTGATTTAGG TTTTAGTTCG GCAAAAACCT TTGACTTGGA GGTTTGGCTT
CCTGGCTATC AAACTTATCG TGAGATTTCA TCTTGTAGTA ACTTCACTGA TTTTCAGGCC
CGAAGAGCCG GAATTAAATT TAAAACAGGC AAAGCAAAAC CCCAGTATGT ACATACCCTG
AACGGTTCAG GTCTGGCTAT TGGCAGGACA CTGGCTGCGG TGCTGGAAAA CTACCAGCAA
AGAGACGGTT CGGTAAAGGT ACCTAGGGTT TTACAGCCAT ATATGGGTGG TTTGAAGGAG
ATAGCCAGGT AA
 
Protein sequence
MLDLKFVRNN PETVKEALAK RGNRGSLDEF LKLDEQRREK LVVVEQLKNR RNTVSQEVGR 
LKKEGQPAEQ IVLEMRQVSQ EIKDLDDQLR VIEEELQAIL LGIPNIPDVS VPVGKSETDN
IEIRLWGEPT KFDFEPKAHW DIGEGLDIID FERGAKVTGA RFSFYKGLGA RLERALINFM
LDLHTSQHNY VEIFPPFIAN QDSMQGTGQL PKFAEDMFKL ENTNYYLIPT AEVPVTNLYR
EEILDGEKLP ICHVAYSACF RAEAGAAGRD TRGLIRQHQF NKVEMVKFCH PDTSFEELDK
LVLNAEKVLQ LLELPYRLII LCTGDLGFSS AKTFDLEVWL PGYQTYREIS SCSNFTDFQA
RRAGIKFKTG KAKPQYVHTL NGSGLAIGRT LAAVLENYQQ RDGSVKVPRV LQPYMGGLKE
IAR