Gene Dtox_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4316 
Symbol 
ID8431331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4480452 
End bp4483394 
Gene Length2943 bp 
Protein Length980 aa 
Translation table11 
GC content48% 
IMG OID645036506 
ProductSNF2-related protein 
Protein accessionYP_003193603 
Protein GI258517381 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC GTAATATCAT TCGAGTTTCT TCGCAATGGC TGGGGGAAGG GGTATTTTTT 
ATCCGGGCCG AGCAGCAGGA TTTAATTAAT CATTATATGT CCAATGTTAC AGAATTGAAA
TTCCGCCTTT TCACTCGCCA CCGTCCAACC TTTTACGGCA CGTTCGTTGA AACTATGGAG
CACAACCGTC AGGTGGGATT GAAGCTCTCA CCTCGTCTGG CTCTGGATTT TTTTGCTGAG
TCCACTTACA GTAAGTTTCT TGACTGGCAA TGGAGTGAGG AAATTCTTAA ACTAAGGCAA
ATTGCCCCCC GGATTAAAGA GGCTCTGAGC CAGGGTCATT GGCGGCCTGA TTTTCAGAGA
TGGCCGGCCG GGAAACCTGC CTGGAAGCTG GATTGGCCTG CCGACCAGGA TTTGTCTGCT
CTGCCCCACT ATACAGCAGA ATGGATAGAC GGTATAATTA ATGATTTGAT TGCGCAAAAT
CAGGAAATAA GTCTGGCCTG GGTTAACCTG CGGCAAATAT ACCCCTTGCT TGGTAATCAT
AGCGGCGTAA ATATAAGTAA CGAAGAAAGC TGGTTAGAGG CCATTGGCTG GAAGCAGGAC
GATACTCCCT TTAAGACCTG CCTCCAGCTT ATTGAGCCGG GAGAGGATTA TAGCGAGTGG
AATTTAAAGG TCTTGTTGCA GGATAAAGTG GATGCAGCTA AGCTGGTTGA ATGGCATCCG
GATTTATTTT CAGTCGATGA AGCTTTTCTG CGGGCAAACA GCGCTCCGGA GTCAAGCCAG
TCGGAGGATA ACATCCTGGT TGCCGAGGCA GAAGTTCCGG CTCAATGGGA GGATCACCGG
AGGAAAATTG TCCGGGATAT TAACCGCTGG TTGGAATTGG TGCCCTGGCT GGCTGACCGG
CAGAATAGCT GCCAGACAGG AGAAGAGCCG TCATTGCTTC GCCGGGAATT GGGCGAGACA
GAGGCCTGGC AATTTCTTGC ATCCGACAGT CTGCAATTGG CGGATGCCGG TTATACTGTT
TTTTTACCTA AATGGTGGGA AGAGGTGCAG CATCTGAAAC CGCTTTTGAA GGTAAAAACC
CGTTCTTCCG TTGGCAACTG GGGTGAGGGC TGGCTGGGAG CAGACCGGCT GGTACAGTTT
GATTGGCGTC TGTCAGTAGG GGATGTGGAG TTATCGGAAG AGGAGTTTCG CCAGTTGGCT
GATAAAAAGC GCCGCTTAAT GCAGATTCGG GGTAAATGGG TGCAGTTGGA TCCAGCGTTT
TTGCAAAAGG TGCAAAAAAT TATTAAACAG AAAAAGAACA TGTCTTTGCC GGAGCTTTTA
CAAATGCATT TTCTCTCGCC GGACCGGGAA GAGAAAATTA CAGATGAGGA CGGTGGAGTT
GAGGAAGACC TGCAGGTAGA GGTGGAACTG AACCAGCAGT TGAGCAGTAT GGTAGAACAG
TTAAAACAAC AAATAGATGT TTGTCTGGAG GAACCCTCTT CAGCTTTTCG CGGCAAGCTG
CGCCAGTACC AAGTGCGGGG AAGTTCCTGG CTGCTCTTTT TGCGCCGCTT CGGACTAGGT
GGTTGCCTGG CCGATGATAT GGGCCTGGGC AAGACAATTC AATGGATTTC TTATCTTTTG
AAAGTCAAGG AAAAGGAGAA TCCGTCCACG CCCTCCCTGT TAATCTGCCC TACTTCAGTG
ATAGGCAACT GGCAGAAGGA ACTGGCCAGG TTTGCTCCTG ATATAAGGGT GCACCTGCAT
TACGGTTCCC AACGCGAAAA AGGAGAAGCT TTCCCACGAT CTTTGGCAGA AAAAGATTTG
GTGCTGACTT CCTATAATTT GGCTCACTTG GACGAGACGG AGCTGGGTTC CGTGGAATGG
GATTGTATTT GTCTGGATGA GGCACAGCAT ATTAAAAATG CTTATACCAA GCAGGCATCG
GCAATACGGC GTTTTGCGGG CAGGCACAGG GTAGCCCTTA CCGGTACGCC AATGGAAAAC
CGCTTGACAG AACTCTGGTC GATCATGGAC TTTTTAAACC CCAGATATTT GGGCAGCATC
AACGAATTCA ATAAGCGTTT TGTCAGTGTT ATTGAGCGGA AGCGAGAAGA GAAGCATATA
AAACAAGTAC AGAGACTCAT TAGACCCTTT CTCCTGCGGC GGGTTAAAAC AGATCCGGCT
ATTGAACTGG ATTTGCCTGA AAAACAGGAA CTCAAGGAGT ACATCCCGCT AACAGTAGAG
CAGGCCTCAC TTTATGAAAA TACGTTGCAG AATATGTTTG AACGTTTAGA GGAAGCTGCC
GGTATGGCCC GCAGGGGTGT GATTCTTTCC ACCTTGATGA AACTGAAGCA GTTGTGCGAT
CACCCGGCTC TTTTTTTAAA AGAGGAGGTT CCGTCCAATA TCAGAGAAAG GTCGCTAAAA
CTGGAGAGGC TTTTGGAAAT GGTGGAAAAG CTGCGGCAGG AAGGGGATAG TTGCTTGATT
TTTACCCAGT TCGTGGGGAT GGGGCAAATG ATCCAGCGGC TATTGCAAAA AGAACTGAAA
GAAGAGGTTT ATTTCTTGTA CGGTGGAACA CCCAGAGCCA GGAGAGAGGA AATGATCACA
GGTTTTCAAA ATTTTGATAC AACAAAAAAT CCCAGCAATA TATTTGTTCT GTCACTTAAA
GCAGGTGGAT TAGGGCTTAA TTTAACAGCA GCCAGCCATG TCTTTCATTT TGATCGCTGG
TGGAACCCGG CCGTGGAAAA CCAGGCAACT GATCGCTCAC ATAGGATTGG CCAACAGCGG
CATGTTCAGG TGCATAAATT TATCTGTCTG GGTACGCTGG AAGAACGTAT TGATGAGATG
CTTGAGCGTA AACAGGGCTT AAACGAGCAG ATTGTCGGCG GCAGTGAAGC CTGGATTACC
GAGCTGTCTA CCGGTGAACT GAGGGAGGTT TTTGCCCTGC GCAGGGAATG GGTCGCTAAT
TAG
 
Protein sequence
MTPRNIIRVS SQWLGEGVFF IRAEQQDLIN HYMSNVTELK FRLFTRHRPT FYGTFVETME 
HNRQVGLKLS PRLALDFFAE STYSKFLDWQ WSEEILKLRQ IAPRIKEALS QGHWRPDFQR
WPAGKPAWKL DWPADQDLSA LPHYTAEWID GIINDLIAQN QEISLAWVNL RQIYPLLGNH
SGVNISNEES WLEAIGWKQD DTPFKTCLQL IEPGEDYSEW NLKVLLQDKV DAAKLVEWHP
DLFSVDEAFL RANSAPESSQ SEDNILVAEA EVPAQWEDHR RKIVRDINRW LELVPWLADR
QNSCQTGEEP SLLRRELGET EAWQFLASDS LQLADAGYTV FLPKWWEEVQ HLKPLLKVKT
RSSVGNWGEG WLGADRLVQF DWRLSVGDVE LSEEEFRQLA DKKRRLMQIR GKWVQLDPAF
LQKVQKIIKQ KKNMSLPELL QMHFLSPDRE EKITDEDGGV EEDLQVEVEL NQQLSSMVEQ
LKQQIDVCLE EPSSAFRGKL RQYQVRGSSW LLFLRRFGLG GCLADDMGLG KTIQWISYLL
KVKEKENPST PSLLICPTSV IGNWQKELAR FAPDIRVHLH YGSQREKGEA FPRSLAEKDL
VLTSYNLAHL DETELGSVEW DCICLDEAQH IKNAYTKQAS AIRRFAGRHR VALTGTPMEN
RLTELWSIMD FLNPRYLGSI NEFNKRFVSV IERKREEKHI KQVQRLIRPF LLRRVKTDPA
IELDLPEKQE LKEYIPLTVE QASLYENTLQ NMFERLEEAA GMARRGVILS TLMKLKQLCD
HPALFLKEEV PSNIRERSLK LERLLEMVEK LRQEGDSCLI FTQFVGMGQM IQRLLQKELK
EEVYFLYGGT PRARREEMIT GFQNFDTTKN PSNIFVLSLK AGGLGLNLTA ASHVFHFDRW
WNPAVENQAT DRSHRIGQQR HVQVHKFICL GTLEERIDEM LERKQGLNEQ IVGGSEAWIT
ELSTGELREV FALRREWVAN