Gene Dtox_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4178 
Symbol 
ID8431192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4355234 
End bp4355683 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID645036371 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_003193469 
Protein GI258517247 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000811694 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAGTTG CCATAGCCGC TGATCACGGG GGCTTTCAGT TAAAAAAAGA AATTATTGAG 
TGCCTGCGTG CTGACGGTTT TGAGTATAAA GATTTTGGTA CATATTCAGA GGAGTCAGTT
GATTACCCGG ATTTGGCTCT GGCTGTGGCG GAAGCCGTCA AGGCCGGGGA TTATGACAGA
GGAATAATTT GCTGCGGTAC AGGCATAGGA GTCTCCCTGG CGGCAAATAA AGTGCCGGGC
ATTCGTGCCG CCCTTTGTCA TGACACTTTT TCCGCGCGTT GTGCGCGGGA GCATAATGAC
GCAAATATTT TAACTTTGGG TCAGAGGGTG ATTGGCGCCG GTTTAGCTGC GGAAATTGTC
AGGATCTGGC TGAATACTGT TTTTGCCGGT GGACGTCATG CCCGCAGAGT AGAAAAGATT
GCCCAAATAG AAGCAAAATA TAATAAGTAA
 
Protein sequence
MRVAIAADHG GFQLKKEIIE CLRADGFEYK DFGTYSEESV DYPDLALAVA EAVKAGDYDR 
GIICCGTGIG VSLAANKVPG IRAALCHDTF SARCAREHND ANILTLGQRV IGAGLAAEIV
RIWLNTVFAG GRHARRVEKI AQIEAKYNK