Gene Dtox_4140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_4140 
Symbol 
ID8431154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp4311483 
End bp4312346 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content36% 
IMG OID645036333 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003193431 
Protein GI258517209 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000198546 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATAT TGTTAACAGG CGCTAATGGT ATGCTGGGAA AAGATTTGAT AGAAGTACTA 
AAAGATAAGT ACTGTCTTAA ACTGACAGAT AAAAATGAGC TGGATATTAC TGACTATATA
AAATGCGAAG ATTATATTAT CAATGAAAAA CCTGAATTAA TCATAAATTG TGCGGCTTAT
ACTTTAGTTG ATAAGTGCGA AGAAGAAAAA GAACTGGCTT ATAAAGTTAA TGCTATTGGA
CCCAGGAATC TTGCGATTAT TGGCAATGAA CACAATATAC CGATACTGCA TATAAGCACA
GATTATGTAT TTGACGGTCT AAAGGGTGAA AATTACTTAG AAAATGATAT TAAGAGTCCT
TTAAGCATCT ACGGGGAAAC AAAATCATTG GGAGAGGACT ATATTGTTGC TCTTACCAAC
AGATTTTATA TTGTTAGGAC ATCCTGGTTA TTCGGTGAAA ACGGAAACAA CTTCATTAAA
ACTATGCTGC AATTAGCAAA ATCAAAGGAT CGCCTAACTG TTGTTAACGA CCAGTTTGGC
ACCCCAACAT ATACCAAGGA TCTGGCTAAG GCTATAGCGA AGCTTATTGA AAAGAACTGT
TACGGTATAT ATCACATTAC TAACAGTGGT TATACCAATT GGTGTGATTA TGCCAGGTAT
ATATTTTCGC TTACCGGGTG TAAAGTTACA GTTGATCCAA TTAGTACTGA AGAGTTTAAC
CGTCCGGCCC CGAGACCAAA ATTTTCAGTT CTTGAGAATA GACTCTGGCA GTTGGAAGGT
TTTCCTGTTT TGCGCAGTTA TAAAGAAGCC GTTAAGGAAT ATATAGAGGT TAACTATAAA
AGCGAGGATC TGATTAATGG GTAA
 
Protein sequence
MNILLTGANG MLGKDLIEVL KDKYCLKLTD KNELDITDYI KCEDYIINEK PELIINCAAY 
TLVDKCEEEK ELAYKVNAIG PRNLAIIGNE HNIPILHIST DYVFDGLKGE NYLENDIKSP
LSIYGETKSL GEDYIVALTN RFYIVRTSWL FGENGNNFIK TMLQLAKSKD RLTVVNDQFG
TPTYTKDLAK AIAKLIEKNC YGIYHITNSG YTNWCDYARY IFSLTGCKVT VDPISTEEFN
RPAPRPKFSV LENRLWQLEG FPVLRSYKEA VKEYIEVNYK SEDLING