Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_4081 |
Symbol | |
ID | 8431095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 4250609 |
End bp | 4252447 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645036280 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_003193378 |
Protein GI | 258517156 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGTA AGGCAAGATT ACTGGTTTTA CTGTGTTGTG ATTTTCTGTT GGTGATTATG TCTTTGCTCG TTTCACTGTT TATCCGTTTC CCCAGTTGGC CTGAATTAAG CAAGGCTTTA GTTAACTATA TTAATTTTGC CCCGGTTTGT GCGCTTGTTA TGCTTGTCTT TTTTTATTTT TTTGGCCTTT ATCAAAGAGT ATGGGCCTAT GCCAGCATAG GTGAGTTAGT GACTATAGTA AAAGCGGTTA CAACAGGAAA ACTTGTTGTC ATTGCTTTGA CATATTTTAT TTTTACCCCG TTACCCAGAA GTGTAGTATT AATGTCCTGG GCTTTTAGTA TTATTCTGAT TGGCGGTTCC AGGTTGTGCT GGAGAATATA TGTACAGAAG AAGAAATTTG CCGTGGCCGG CTGCCCACTG GATAAAAGGA AAACGCTTAT AGTTGGTGCC GGTGATGCCG GGGTGCTGGT GGTTCGCGAA TTAATGAACC ATAACAGTGA GTATTTGCCG GTAGGATTTA TTGATGATGA TGCAAGTAAG CAGGGTATGG TTATCCTGGG CATACCGGTG TTAGGGAAAC GTGAAGAATT GCCGTCGATT ATCGAAAAAT ACAGAATTAA AGAAGTAATT ATCGCTATGC CGTCAGTGTC CGGACAAGTT ATAAAGGAAA CTGTCGAGAA GTGTCACAAT TCACAGGTAA AATTAAAGAT ATTGCCGGGT GTTTACCAGT TAATCAGCGG GCAAGTGACC GTAAATCATA TTCGCGATAT TCAGGTGGAA GATTTATTGG GCAGAGAGCC TGTTGAGGTA GATTTAAGCG AGATTGCCGG TTATTTAACA GATAGGGTGG TTTTGGTTTC CGGTGCCGGC GGTTCGATTG GTTCAGAGCT ATGCAGGCAG GTGGTCAGGT TTAAGCCCAA GCTTCTGGTT GTTTTGGGGC ATGGTGAGAA CAGCATACAT AATATAGTCT TTGAGCTTCG TGAAATGCAT GGCAGCGATC TGCCTATTGA GATAGTGATT GCTGATATAA GGGACAGGCA AAAGATTAAT TTGATTTTTA AGAAATATAG ACCGTCAGTG GTTTTTCATG CTGCTGCGCA TAAGCATGTA CCTCTGATGG AGCTGCATCC TGATGAGTCA GTGAAGACGA ATGTTTTGGG TACAAAGAAT TTAGCAGAAG CAGCCGACAG GGTTGGAACA GATGTTTTTA TTATGCTTTC AACAGATAAA GCAGTTAATC CTTCCAGTGT TATGGGGGCT ACCAAGCGTT TGGCTGAGCT GATATTGCAG CAGATGAACA GTATAAGTGA TACTGTTTAT GCGGCTGTTC GGTTTGGCAA TGTCTTGGGG AGCAATGGCA GTGTAGTGCC TATCTTTAAG CGGCAGATTG CTCAGGGAGG GCCGGTTACT GTTACTCACC CGGAAATGAA GAGGTACTTT ATGACTATAC CCGAGGCTGT GCAGTTAGTG ATTCAGGCTG GGGCTATGGC TCAGGGCGGG GAGATATTTG TGCTGGACAT GGGTGAGCCG GTGAAGATTG TGGATTTAGC TAAATGTATT ATTGATTTGT CGGGAGTGGA TTGTGAAATT AAATTTACCG GGATTAGGCC GGGGGAGAAG CTGTTTGAGG AATTGCTGAC GGCAGAAGAG GGTTCTTCTG CTACCCGGCA TAGGAGGATA TTTGTGGCTA ATGCGGGGAG TGTGAATTTG GAGACATTGG AGTTGGAAAT TCTTCGTTTG AGGGAGTTGG GATGGGATGT TGTGACTGGG GACGTTTTTA AAGCATTGAC GGTTCTCCTT CCAAATATAA AGATATATCG AAAAGATATG GTTGGTTAG
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Protein sequence | MSGKARLLVL LCCDFLLVIM SLLVSLFIRF PSWPELSKAL VNYINFAPVC ALVMLVFFYF FGLYQRVWAY ASIGELVTIV KAVTTGKLVV IALTYFIFTP LPRSVVLMSW AFSIILIGGS RLCWRIYVQK KKFAVAGCPL DKRKTLIVGA GDAGVLVVRE LMNHNSEYLP VGFIDDDASK QGMVILGIPV LGKREELPSI IEKYRIKEVI IAMPSVSGQV IKETVEKCHN SQVKLKILPG VYQLISGQVT VNHIRDIQVE DLLGREPVEV DLSEIAGYLT DRVVLVSGAG GSIGSELCRQ VVRFKPKLLV VLGHGENSIH NIVFELREMH GSDLPIEIVI ADIRDRQKIN LIFKKYRPSV VFHAAAHKHV PLMELHPDES VKTNVLGTKN LAEAADRVGT DVFIMLSTDK AVNPSSVMGA TKRLAELILQ QMNSISDTVY AAVRFGNVLG SNGSVVPIFK RQIAQGGPVT VTHPEMKRYF MTIPEAVQLV IQAGAMAQGG EIFVLDMGEP VKIVDLAKCI IDLSGVDCEI KFTGIRPGEK LFEELLTAEE GSSATRHRRI FVANAGSVNL ETLELEILRL RELGWDVVTG DVFKALTVLL PNIKIYRKDM VG
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