Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3955 |
Symbol | |
ID | 8430970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 4135413 |
End bp | 4137341 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645036173 |
Product | AAA ATPase |
Protein accession | YP_003193271 |
Protein GI | 258517049 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.262295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00100841 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGAAAA TAGAAAAAAT AGATTTGCAT TTAATTGACG GCACCACTTA TCAGATAGAT AACAAACCGG GCCTGACTTA TATTATAGGG CCTAACGGAA CAGGCAAATC CTATGCTTTC AGAAAATTTG CCGAGGAAAA TATTGGCCGG GCTCTTTATA TTTTGCCTTC CAGAGATGAT ATGAGGCGCA ATCTATATAA TGTGGGGCAT GGAGAAGAAA ATGATTTTTT CCGCGAATGG GTCGTCTATG ATCAGGTATG CCGTTACTGG GGCAAGGCTT TGAAGCAGCC GGGTCTTCTG GCGATGGCTT TTTCCTTTCT GGAGCGCCTG GGCGTACCCC ACAGAATGTC GATAAGTGTG GAAGAGGGTG AAATTAAGTT TCAAATCTGT GATGAGTCGG TATGTTATGG CAGCAATCAG GCAATGTCAG GTTTACACAA ACTGCCGGTG CTGGGCATAG CGGTTTATGA TCCCGAGCAT AAACTGGTTA TTATAGATGA ACCGGAGCAG TCTCTTCACC CCCAGGCACA GCATATTTTT GTGCAGGTTC TGCGTGATGT GGCCCGCCTG CAGGGCAAGC ACTTCGTGCT GATTACCCAC TCGCCGACTA TGGTTGACCT GCGTGACGCC GGGGATCTGA CCAGAGTGGT TTTTTTCCGG AGGCCCAAAA AGTACCTGAC GGAACGCAAG ATTTTTCAGT TAAGTATGGA TGACGCGCAG CGTTTCAGTG AGCTGCTGCC GGGCTTGACT TCTTATAAAC GTGAAATATT CTTTGCTGAT AAAGTGATTT TGGTGGAAGG ACAGCATGAC AGGGATGTCT TTATGGCTTT GATTGAGTCC GGGGGTTTTG GACTATCCCT GGCCCGTACC AGTGTACTGC CTTTGGGCGG GGTAGGCTTT ATGGCTAAAT ATACGGCTTT TTTTAAAGAA ATAGGTGTTA AGCCTTTCAT TATTTGTGAT CGTGATGTAT TGTATCCTTC TGCCGGTATT CGTTGGTTTT GCGGTCGTAT GGAGGGTGAG AGGCTGGACT GGCGGGGCTG GATCAGTCCC TCGCAGGTTA AGGAATATCT TCAGGGCAAA GAGATGAAGG TACCTGCGGA TCGTTATGAT TTGCAGCCTG CGGAATTTGA TAACATGGAA CAAATAGCGG CCCGGCTGAG AAATTTGATG AAAAAAGCGT TGGAGAAAAG CGAACAGCTG ATGGATAGGC TGCAAGGGGT TGCTTCAGCG GCAAATTTGC TGGCCGAACT GGCTAAAAAG AAAAATCTGA CAGATGACTA CAGTGAATAC CGGGCCTTTC ATTTACTGAT GACGGTTGTG CTCAATCATT CCGACTGGTA TAATACGCCT GCGGCAGAAA TCTTTAAGCG CTTGAGGGAG GTATACGAGC AATTGGAGCA CCAGTCTGAC CGCCTGGAAA TACTTATTTT GCGCATAGGG CGCCTGGAGG ATTTGTACCG GCACAGTGGC CGCCTGGATG CCTCCAAAAC AGAGAAATCC AGGCGCGAGG CTTTTGATAT ACGCAGATTA TATCAAAATA ATAAGGAACA AGTGGATGTT GATTATCAAG AGGTGATTGA TCCTCTGATT AGAAAGCGCT ATTTGCTCCG TATGCAAAAC GGTATTCCGC ACGAGGCGGC GGCTGTATTA TCGGGAAAAA TCCATGAATT ATATGATTTC CTTTTTAGTG CCGGAGAACT GGCGGAGCGT GTGCAAAAAT TGAGAAGTAC GGGTAAGCTG GAAGAACTTT CCGCAGGTGC GGAAATTGTA GATTTTTTAC CCGGCGCAGA CCCCCCGCAG CTAACAATGG AGATACCCCT GCTGAAAGGT TATCTGTCAG TTGACGGTAG AATAACTTTA ACAGCGGGTA AAAGGCCTGA AGTGTTTGAC ATGTTGTTCA AAAGAAGCTG GCAGGGTGGG AAAAGCTAA
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Protein sequence | MEKIEKIDLH LIDGTTYQID NKPGLTYIIG PNGTGKSYAF RKFAEENIGR ALYILPSRDD MRRNLYNVGH GEENDFFREW VVYDQVCRYW GKALKQPGLL AMAFSFLERL GVPHRMSISV EEGEIKFQIC DESVCYGSNQ AMSGLHKLPV LGIAVYDPEH KLVIIDEPEQ SLHPQAQHIF VQVLRDVARL QGKHFVLITH SPTMVDLRDA GDLTRVVFFR RPKKYLTERK IFQLSMDDAQ RFSELLPGLT SYKREIFFAD KVILVEGQHD RDVFMALIES GGFGLSLART SVLPLGGVGF MAKYTAFFKE IGVKPFIICD RDVLYPSAGI RWFCGRMEGE RLDWRGWISP SQVKEYLQGK EMKVPADRYD LQPAEFDNME QIAARLRNLM KKALEKSEQL MDRLQGVASA ANLLAELAKK KNLTDDYSEY RAFHLLMTVV LNHSDWYNTP AAEIFKRLRE VYEQLEHQSD RLEILILRIG RLEDLYRHSG RLDASKTEKS RREAFDIRRL YQNNKEQVDV DYQEVIDPLI RKRYLLRMQN GIPHEAAAVL SGKIHELYDF LFSAGELAER VQKLRSTGKL EELSAGAEIV DFLPGADPPQ LTMEIPLLKG YLSVDGRITL TAGKRPEVFD MLFKRSWQGG KS
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