Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3953 |
Symbol | |
ID | 8430968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 4133631 |
End bp | 4135055 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645036171 |
Product | diguanylate cyclase and metal dependent phosphohydrolase |
Protein accession | YP_003193269 |
Protein GI | 258517047 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000778513 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACA AAAATACAAA AAAAGGATGT TTTACAAAAC TAAAACAAAG GGAAAAGTTA AGCCACCATC CCCTGATAAA TATAATTCCG GATTTACTTC TGATAATAAA AAAGGACGGA ACCATTGTTG ATTTCAAACC CGGCAAAGAT TTTACCGTTT TTATTTCACC GGACAGATGC CTAGGAAAAA ATATCACTTG CCTTTGGCCG CCTAAATTGG CACAACAAAT TATGGATTAC CTGGAACAAG CATTTCTGAC CAACGGCATA CAAACCTTCG AATACCATCT TAATATCAAT GGCATCCAGT GTGTTCAGGA AGCCCGCATG GTAATCAGCG GCGAGGAAGA AGTCTTAATG ATTGTCCGTG AAATTACCAA ACGCAAGGAA ATGGAACAAA GACTGCGCTA CTTAAGCCTG CATGACTCGT TGACCGGTCT CTACAACCGG ACTTACTTTG AACAGGAAAT GAAAAGGCTG TCCGACAAAA AACACGCCCC GGTCGGCATT ATCATCTGTG ATGTGGACGG TCTGAAACTG ATCAATGACA CTCTGGGCCA TGATAGAGGC GATATATTGA TAGTCAATGC CGCCAACGTA CTGCGCAGCT CTTTTCGATC AAAGGATGTA ATAGCCAGAA TTGGCGGTGA TGAATTCGCC ATACTGCTTC CCAACAGCAG TGCTCCGGCA GTGGAAAAAG CTTACCGGCG CATTCATCAC TCCGTTAATA AATACAATAA AGAAAACCCG CTCATAATGC TAAATATTTC AGTAGGTTAC GCTGTCAGTA CTGAAGAATC ATCTGACTTA AACCAAATTT TCAAAGAAGC GGATGACAAA ATGTACCAAA TAAAATTGAG CAGCAAAACC AATACACGCG ACGCCATAAT GCAAACTCTT CTTAAAAAGC TGCAAATTAA AGAGTGCACC TCTGAAAACC GCATTCAGCG CATGCAGGAT CTGGTTGAGG TAATGGCCAA TGTCGTAGGA TTAAATCACT CACTGGAAAA ACTGCGCAAT TTTACACGTT ACCACGATAT CGGAAAGCTC GGTATCTCCG ATAAAATATT ATTTAAACCT ACAAGCCTAA CCCCGGAGGA ATATTGCCAA ATCAGAAAGC ACTGTGAAAT CGGGCACAGA ATAGCTCAGT CCAGCCCCGA TCTGATGCTG ATAGCAGACT GGATACTCAA ACACCATGAA TGGTACAACG GCAGCGGCTA CCCCCTTGGC TTAAAAGGCG AGGAAATACC TTTAGAATGC CGCATATTCT CCATAGCCGA CGCTTACGAC ACTATGACCA ATAACCAGCC CTACAAGAGA GCCATGACAC ACGAAGAGGC GCTGGCAGAG CTTCGGAGAT GCGCCGGAAC TCAGTTTGAC AGAGGAATAG TGGAAATATT TATTCAACTT TTTGATGAAA ATTAA
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Protein sequence | MKNKNTKKGC FTKLKQREKL SHHPLINIIP DLLLIIKKDG TIVDFKPGKD FTVFISPDRC LGKNITCLWP PKLAQQIMDY LEQAFLTNGI QTFEYHLNIN GIQCVQEARM VISGEEEVLM IVREITKRKE MEQRLRYLSL HDSLTGLYNR TYFEQEMKRL SDKKHAPVGI IICDVDGLKL INDTLGHDRG DILIVNAANV LRSSFRSKDV IARIGGDEFA ILLPNSSAPA VEKAYRRIHH SVNKYNKENP LIMLNISVGY AVSTEESSDL NQIFKEADDK MYQIKLSSKT NTRDAIMQTL LKKLQIKECT SENRIQRMQD LVEVMANVVG LNHSLEKLRN FTRYHDIGKL GISDKILFKP TSLTPEEYCQ IRKHCEIGHR IAQSSPDLML IADWILKHHE WYNGSGYPLG LKGEEIPLEC RIFSIADAYD TMTNNQPYKR AMTHEEALAE LRRCAGTQFD RGIVEIFIQL FDEN
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