Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3916 |
Symbol | |
ID | 8430930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 4086582 |
End bp | 4087469 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645036133 |
Product | integrase family protein |
Protein accession | YP_003193232 |
Protein GI | 258517010 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0254607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.244131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTGACA TCTATTTGGA CAAACTGAAA AGAGAGGGTA AGTCTGACCT GACCATCCGG CAATACCGTT CAAGCCTGGC AAGATTCCAG AACTGGTTTG AGGCAGAAGG GGTAGGAAGG GGGGACGGGG GTACTACCGG CATAGGGCAA GCTACAGCAA TAGACATATC ACATTTTAAA AGATTTGCTG TCAGAAATTT CAAGCCTAAT ACCGTCAAAC AATCACTCTC TCACCTTCGT TCCTACTTTC AGTTCCTTGT TTCACAAAAC ATAATACCCG ATAACCCTGT TCAATTCGTG GCTACCATAA CCACAGCTAA AACAACTCCC AAGTGGCTTA CACGGACTGA ACAGAACACT ATAATCCGGT ACGTTAGGAA ATATGGAGAC CTCCGTGAAC TCACCATGAC AACCCTGTTA CTCCATACCG GCCTTCGGGT ACAGGAACTG GCTGATTTAC GGTTGGTTGA CATTGAAATT GGCGAAAGAA AGGGTAAAGT TATCGTAAGA CAGGGTAAGC ATGACCGTCA CAGAGAAATA CCACTTAATG CTGACGTGAG ACACTTGCTG AAAAAATATC TGACGGAGTA CAGCATAAGT GCCTATTTGT TCCCTTCTAA AACCGGGGAT AAAATGACTA CCCGGAATAT ACAGTACATC ATGGAGAAAT ATCGTAAACT TACCGGTATT GACCATTTCA ATTGCCATGC TTTAAGACAT ACTTTTTGCC ATGAGTTAGT CACACGTAAA ATATCTTTGG ATGTTGTGGC AAGACTGGCC GGACATATGA GGACTGATGG AACTCCGAAC ATTCAACAAA CACTCGTATA TACACAGCCA GGGGAAGAGG ATTTACAGAG AGCTGTGGAA GAATTGAGTT GGAGATAA
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Protein sequence | MFDIYLDKLK REGKSDLTIR QYRSSLARFQ NWFEAEGVGR GDGGTTGIGQ ATAIDISHFK RFAVRNFKPN TVKQSLSHLR SYFQFLVSQN IIPDNPVQFV ATITTAKTTP KWLTRTEQNT IIRYVRKYGD LRELTMTTLL LHTGLRVQEL ADLRLVDIEI GERKGKVIVR QGKHDRHREI PLNADVRHLL KKYLTEYSIS AYLFPSKTGD KMTTRNIQYI MEKYRKLTGI DHFNCHALRH TFCHELVTRK ISLDVVARLA GHMRTDGTPN IQQTLVYTQP GEEDLQRAVE ELSWR
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