Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_3829 |
Symbol | |
ID | 8430843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 4013122 |
End bp | 4014999 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645036057 |
Product | hydrogenase, Fe-only |
Protein accession | YP_003193156 |
Protein GI | 258516934 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCAGG TTCAGGAGTA CACGCCGGGT CCGGTCATTG AGGGTGCGGG CCACCTGTTT GAAAAAGATG AAAAGAACTT AGAAAAGGTG CGGCTGTTTA TTGACGGTAA GGAAGTGACG GCGCTAAAGG GAATTTCTGT ACTGGAAGCA GCCAGATCTG TGGGCATAAC CATACCCAGT CTATGTTATT TAAAGGGTAT TAATGAGATA GGTTCCTGCC GGGTTTGCAT GGTGGAGGTG GAAGTTAACG GGGTTATGAC TTTGCAGGCT TCCTGTGTGT ATCCGGTTGC TGAGGGAATC AGGGTGTACA CCAATACGCC GCAGGCCCGC CGTGTCAGGC GGACTATGGT GGAACTCCTG CTTTCCGATC ACCACAGGGA GTGCACTGCT TGCATAAGAA ACTTAAACTG TGAACTGCAG AACCTGGCTG ATGACCTGGG CATCAGAAAT ATTAAATACA CCGGTGAAAC GAATTATGTT CCCATATTTG CAAATAACCC TTTTATCATG AGGGACTACA ATAAGTGCAT TAAATGCCGC CGCTGTGAGG CTATCTGCAG CAAGGTTCAG GAGGTAAACG TGTATTCTGC TTTAGGCCGG GGGTTTGAAG TAAAAATAGC GCCTGCTTTT ATACAGGATT TGTCCGCCGT CGCCTGCATT ACCTGCGGGC AGTGTGTTAT TGCCTGTCCC ACCGGTTCAC TGGTGGAAAA AGAGTGCATT GAAGAAGTAT GGGATGCTCT GGCAGATAAG GATAAGTATG TGGTGGTGCA AACCGCCCCG TCCATACAGG TTACTTTAGG AGAGTCTTTC GGTCTTCCGG TAGGGACAAT TGTTACCGGA AAACTTGTAT CGGCACTGAG GCGGATGGGG TTTGACAAAG TTTTTGCAAC CGATTTTACT GCTGATTTAA CTATTATGGA AGAGGCGCAT GAACTGTTAG ACAGACTAAA CGGCCATGGC AGGCTGCCGC TTTTGTCTTC CTGCAGTCCC GGATGGGTCA AATTCTGCGA GCATTTTTAT CCCGAGTTCA CGGAAAATAT GTCTACCTGC AAGTCACCGC ATGAAATGTT CGGTGCCTTG ACCAAGACCT ATTTTGCCGA GAAAGAGGGG CTTGATCCTG AGAAAATTGT GGTGGTGGCC ATTATGCCTT GCACTGCCAA GAAGTATGAG GCCTCACGTC CGGAATTCGG CAATAAAAGA TTTAAAGATG TAGATTGGGT GCTGACTACC AGGGAACTGT CCCGCATGAT TCGACAGATG GGAATAAACT TTACTGAACT TCCTGATGAG GACTATGATC AGCCTATGGG CATGTCCACA GGGGCGGGAG CAATTTTTGG CGCCACGGGC GGAGTAATTG AAGCCGCTGT GCGTACAGCT TATTACCTGT CAACCGGAGA AGAAATGGAT TTATTGGACT ACAGTGAATT TGAGGGAATC AGCGGCTTGA AAATAGCCGA GGTAAAGCTG AAGGACAGAA CTATTAAGGT AGCGATTGCC CACGGTACCG GCAATGCCCG CCGCCTGCTG GACAGATTGA AGGCCGGAGA AGAATTTCAT TATGCCGAAA TTATGGCCTG CCCCGGAGGT TGTGTGGGCG GCGGCGGACA GCCTATTTTC GGAGGCAGGG AGCACAAGGA AATCTCGCTT GATTACAGGC ATAACAGGGC TGACGCCCTG CACAGGATTG ATCTGAGCAA AGAACTTCGC CGATCACATG AAAACCCGGC GGTCAAGAAG ATATATGAGG AATATTTAGG GCGTCCCCTG GGGGAGAAAT CCAGGGAATT GCTGCATACC TGCTTTACCC CAAGGGGCAA AATGCCCGGT TTTGCCTGGC AGGATTTGCC GCCGGTGGAT CATAAATGTT TGCATTGA
|
Protein sequence | MPQVQEYTPG PVIEGAGHLF EKDEKNLEKV RLFIDGKEVT ALKGISVLEA ARSVGITIPS LCYLKGINEI GSCRVCMVEV EVNGVMTLQA SCVYPVAEGI RVYTNTPQAR RVRRTMVELL LSDHHRECTA CIRNLNCELQ NLADDLGIRN IKYTGETNYV PIFANNPFIM RDYNKCIKCR RCEAICSKVQ EVNVYSALGR GFEVKIAPAF IQDLSAVACI TCGQCVIACP TGSLVEKECI EEVWDALADK DKYVVVQTAP SIQVTLGESF GLPVGTIVTG KLVSALRRMG FDKVFATDFT ADLTIMEEAH ELLDRLNGHG RLPLLSSCSP GWVKFCEHFY PEFTENMSTC KSPHEMFGAL TKTYFAEKEG LDPEKIVVVA IMPCTAKKYE ASRPEFGNKR FKDVDWVLTT RELSRMIRQM GINFTELPDE DYDQPMGMST GAGAIFGATG GVIEAAVRTA YYLSTGEEMD LLDYSEFEGI SGLKIAEVKL KDRTIKVAIA HGTGNARRLL DRLKAGEEFH YAEIMACPGG CVGGGGQPIF GGREHKEISL DYRHNRADAL HRIDLSKELR RSHENPAVKK IYEEYLGRPL GEKSRELLHT CFTPRGKMPG FAWQDLPPVD HKCLH
|
| |