Gene Dtox_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3701 
Symbol 
ID8430709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3873421 
End bp3875817 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content42% 
IMG OID645035927 
ProductP4 family phage/plasmid primase 
Protein accessionYP_003193032 
Protein GI258516810 
COG category[R] General function prediction only 
COG ID[COG3378] Predicted ATPase 
TIGRFAM ID[TIGR01613] phage/plasmid primase, P4 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATG GAAAATATGA GCTTATTCTT TCGCGTTTAG AAAATGTTCA AGTAAGTGGC 
AATGGATATA CTGCCCGGTG CCCCGTTGAA TCACATAATG ATACTAAGAA CAGCCTATCA
ATAAGAACTG GTAATGACAA CAGAATTCTT TTAAAATGTC ACGCCGGTTG CTCTATAGAG
GATATTGTTC GAGCCCTTGG CTTAACGATG CGCGATTTGT TTCCTTTTCC TAATCATCAA
AACAATGACC GTAATAACGC TTCGGGTATT ACTTTGAAAG AACTGGCGAC AGATAAATAT
ATGCCAATAA ATTTTCTAAC TTCACTAGGA GTTTACCAAT CTGGCCGGGT AGTTAAAATC
CCTTATCGTC TTGAGGACGG CTCCCCTGCC CCCCGACAGC GGTTAAGAAC AGCTTTAAAG
GCTAAAGACG GCAGTCGGTG GGCAAAGGGC GAAGGAAGTC CAGTGCCGTA TGGACTTTGG
AAATTACGAG AAGCGAGAGA TGCCGGACAG ATTGTTCTAT GTGAGGGTGA GTCAGATGCC
TGGACACTCT GGTATCATGG CTTTCCTGCA ATGGGTCTGC CTGGTGCAGA TATGACAAAA
AAACTAAAGA TAGCTCATTT CCAGGATATA AGTCGGGTTT ACGTGATTCG CGAACCTGAT
CAAGGTGGAG ATACATTTGT CAATGGAATG ACTAAGCAGT TCTCCGGATG GCGCAGCTGG
CGGGGTGAGC TATTCGAGGT AAGGCTTAGT GAGTCAACCG GGGCGAAAGA TCCCAATGAT
TTACACAAAC AAGACCCGGA TAATTTTAAG AATGTTTTTA TGGAGGTTTT AAGTGCGGCG
AAGCCACTTG AAATAGTTAA CCAAAATCTA AAATCAGAAG CAAAACATAT GTTTGCCAAT
GGAAATAATT TAACCGATTT AGGTAATACC CGCCGCCTTG TTACACAGCA TGGGCAAACT
ATTCGATACT GCCACATTTG GAAAAAGTGG CTTATATGGA ACGGCAAGTT TTGGGAGATT
GACAATACCG GTGCAGTAGT GCGTTTAGCC AAAAATACCG TGATGAGTAT CTATGCAGAG
GCATCAAAAG AATCAGATGA AGGTCTGCGA AAAGCGTTAG TGGATCACGC CAGAAAGTCT
GAGGCTGCTT CTCGTATCAA AGCCATGATA ACCCTGGCGG AATCCGAAGA AGGTATACCT
ATAAGCCCGG ATCAATTAGA TAACAACCGA TGGTTATTAA ATTGTTTAAA TGGCACTGTT
GATCTTAAAA CCGGCAAATT GTTACCTCAC AGGCGTGATG ACTACATAAC AAAGATTGCC
CCAGTAGAAT ATAGGCCCGA TGTGGAATGT CCTATATGGC ATACTTTTCT AAATGAAATA
ATGGAAGATA ATCAAAATCT AGTTAGTTTT CTTCAAAGAG CTGCCGGTAT GTGTTTAACG
GGTGATGTTT CCGAACATGT ATTATTTGTT CTTCATGGAA ATGGCCGAAA TGGGAAAAGT
ACACTTTTAA ACATTATGTT AGATATAATG AATGATTACT CAATTCAGGC ACCACCCGAT
CTTTTAATGG CAAAGCATAA CGAACGTCAC CCAACCGAAC TGGCAGACCT GTTTGGAAAA
CGATTAGTGG TATCAATCGA AAGTGACGAG GGCCGCAGAA TGGCAGAATC GCTAATTAAA
CAGCTGACAG GCGGTGACAA AATTAAGGCC CGCCGCATGC GAGAGGATTT TTGGGAATTT
TGGCCTAGCC ATAAATTATG GCTGGCAACA AACCATAAGC CACAGGTACG AGGAACAGAT
ACGGCAATTT GGAGTCGATT AAAACTAATC CCATTTAACG TATCTTTTGC GGGTAGAGAG
AACAAACAAC TACCCGCAAA ACTACTTACA GAAAAGCCGG GTATTTTTAA ATGGTTGGTT
GAAGGTTGTC TGGCCTGGCA ACGGGAAGGA CTGGGAGTAC CTGACGAGGT ACAGGCGGCA
ACTGAAATTT ACCGCACTGA ACAAGATACT TTAGGAAATT TTCTTACAGA ACATTGCATT
ACTAACCCAC TAGTCAGAGT ACCAGCCAGT GATATATATC GTGCCTATAA AGCCTGGTGT
GAGAATAATA ACGAATATGT TTTATCACAA AAGATTTTTG GCACAAGGCT ATCAGAACGA
GGATTCAATA AATCCCGCGG TACCAAGACC GGTGGTTATG TATGGTATGG TATTGGATTA
CTGAACGATC TGAACGATAC TGAACGATTT TCCTATATAA CAGCTTCACG AGAAAATAAA
AGTGAGTTTA TACGGAAAAT CGAATTTAAT CGTTCAGTTC CTTCAGTGGA TAAGGAAAAT
AATGTTAATA GTAAGAATTT TGCTTGGGAA GGTGATTTAC ATAAATTACC TATTTAA
 
Protein sequence
MNNGKYELIL SRLENVQVSG NGYTARCPVE SHNDTKNSLS IRTGNDNRIL LKCHAGCSIE 
DIVRALGLTM RDLFPFPNHQ NNDRNNASGI TLKELATDKY MPINFLTSLG VYQSGRVVKI
PYRLEDGSPA PRQRLRTALK AKDGSRWAKG EGSPVPYGLW KLREARDAGQ IVLCEGESDA
WTLWYHGFPA MGLPGADMTK KLKIAHFQDI SRVYVIREPD QGGDTFVNGM TKQFSGWRSW
RGELFEVRLS ESTGAKDPND LHKQDPDNFK NVFMEVLSAA KPLEIVNQNL KSEAKHMFAN
GNNLTDLGNT RRLVTQHGQT IRYCHIWKKW LIWNGKFWEI DNTGAVVRLA KNTVMSIYAE
ASKESDEGLR KALVDHARKS EAASRIKAMI TLAESEEGIP ISPDQLDNNR WLLNCLNGTV
DLKTGKLLPH RRDDYITKIA PVEYRPDVEC PIWHTFLNEI MEDNQNLVSF LQRAAGMCLT
GDVSEHVLFV LHGNGRNGKS TLLNIMLDIM NDYSIQAPPD LLMAKHNERH PTELADLFGK
RLVVSIESDE GRRMAESLIK QLTGGDKIKA RRMREDFWEF WPSHKLWLAT NHKPQVRGTD
TAIWSRLKLI PFNVSFAGRE NKQLPAKLLT EKPGIFKWLV EGCLAWQREG LGVPDEVQAA
TEIYRTEQDT LGNFLTEHCI TNPLVRVPAS DIYRAYKAWC ENNNEYVLSQ KIFGTRLSER
GFNKSRGTKT GGYVWYGIGL LNDLNDTERF SYITASRENK SEFIRKIEFN RSVPSVDKEN
NVNSKNFAWE GDLHKLPI