Gene Dtox_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3400 
Symbol 
ID8430394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3603307 
End bp3605028 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content45% 
IMG OID645035629 
ProductABC transporter related 
Protein accessionYP_003192748 
Protein GI258516526 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA TGATTAAGAG ACTATCCCTA TTTCCGGTAA TAGCGGCCAT AGCGTTTCTG 
CTGATTCAAG TGATTTGCGA TTTGTATATT CCAACATTGA CAGCGGACAT GGTCAATAAC
GGGATTGTAA AAGGAGACAC GAGCTATATC TGGCAGCTTG GCTTGATTAT GATTCTTATT
TCGCTTGGCG GTTTTGCCGC CGCACTGTTG AATACCAATA TTTCTGCCAG AATCTCATAT
AAACTCGGCT GTGGGCTGCG CAAAGATATT TACCGAAATG CATCCCAGTT TTCGAATGAC
GAGTTTGACA AAATCGGTAC TTCGTCGCTC ATTACACGGA ATACAAACGA TGTGACGCAA
GTGCAGAATC TAATAGAGAT GTTTCTGAAA TTTTTGATTC TTGCTCCGTT ATATCTGATT
GGCGGCGTTT TCATGGCCTA CCGCCTTAGC CCTTCGCTTT CAACCGTTTT TATTATTATT
GTACCGATTG TTGCCCTTGC CGCGATTGGC ATTTCCATGT ATGCCAATCC CCTGTACGAA
AAAATACAGA AAACAATCGA CAGGTTGAAT TTGATTTTCC GGGAAGGGTT GAATGGTGTT
AAGGTTATTC GCGCGTTCGG GAAAGAAAAA CAGGAGTTTG AGCGTTACGA GCAGGATAAC
AACGAATATA CGAAAACCTC TATCCGCGTC AATGCGATTA TTGGTCTCTT GATGCCGATT
ATGAGCTTGA TTATGAGCCT TGCCACCATA GCAATTACTT GGATTGGCGG AAAATCCATT
GATAGCGGAA ACATGGAAAT TGGTACAATG ATGGGCGTTA TCAGCTACTC TGTGCAGATC
ATGACCGGAT TCATGCTTAT TACAAATGTT ATATCATCCA TCCCGCGCGG TATGACTTCT
GCAAAAAGAA TCAACGAGGT TTTGGATATG ACCCCATCCA TCTGTGACGC CAAGAGCTCA
AAGCAGACAT TAGGGCAAGA AGTCTTCCTG ACATTCGATA AGGTTAGCTA TTGCTATCAG
GGAGCGGAGA AAAACGCCAT TCAAGATATT TCGTTTAGTG TCCGCAAGGG GAAGACGCTT
GCCATTATAG GAAGTACCGG CTCCGGCAAA AGCACAATCG TCAATATGAT TCCCCGATTC
TATGATGTCG GCGGCGGAAA GGTTCTTCTC AACGGTACAG ATATTCGAGA TGTTGCGCAG
AGCACATTGC ATGACCGGGT AAGTCTTATC CCGCAGAAAT CCGCTCTTTT CTTCGGGACT
ATTCGTGAAA ACATGCAGCT TGGCAAACCG GCGGCCACAG ACGAGGAAAT ATGGGCGGCG
CTGGAAACCG CAGATGCGGC AGAGTTTGTC AATAAGCTGG ATGGCGGGTT GGATGGTGTT
GTCGAAAAAG GCGGCGGAAA TTTTTCCGGC GGTCAGAAGC AGCGTCTTTG TATTGCGCGG
GCCATTCTGA AAAATGCCGA TGTTTATGTA TTTGACGATT CCTTTTCCGC ATTGGACTTC
AAAACGGACG CTAAAATCCG TATGGTGCTG AAAGGTAGGC TGAAAAATGC CGTCACGGTG
ATTGTGGCAC AGAGAATCAG CACTATCATG GAAGCCGATA AAATCCTTGT TTTAAATGAA
GGAAAAATAG CCGGTGTCGG TACGCATGAC GAATTGAAAC AGTCGAGCGA GGTTTACAGA
GAAATCATCG CATCGCAATT TGAAAAGGGG GAAGTAGCAT GA
 
Protein sequence
MKEMIKRLSL FPVIAAIAFL LIQVICDLYI PTLTADMVNN GIVKGDTSYI WQLGLIMILI 
SLGGFAAALL NTNISARISY KLGCGLRKDI YRNASQFSND EFDKIGTSSL ITRNTNDVTQ
VQNLIEMFLK FLILAPLYLI GGVFMAYRLS PSLSTVFIII VPIVALAAIG ISMYANPLYE
KIQKTIDRLN LIFREGLNGV KVIRAFGKEK QEFERYEQDN NEYTKTSIRV NAIIGLLMPI
MSLIMSLATI AITWIGGKSI DSGNMEIGTM MGVISYSVQI MTGFMLITNV ISSIPRGMTS
AKRINEVLDM TPSICDAKSS KQTLGQEVFL TFDKVSYCYQ GAEKNAIQDI SFSVRKGKTL
AIIGSTGSGK STIVNMIPRF YDVGGGKVLL NGTDIRDVAQ STLHDRVSLI PQKSALFFGT
IRENMQLGKP AATDEEIWAA LETADAAEFV NKLDGGLDGV VEKGGGNFSG GQKQRLCIAR
AILKNADVYV FDDSFSALDF KTDAKIRMVL KGRLKNAVTV IVAQRISTIM EADKILVLNE
GKIAGVGTHD ELKQSSEVYR EIIASQFEKG EVA