Gene Dtox_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3350 
Symbol 
ID8430344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3553016 
End bp3554110 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content41% 
IMG OID645035584 
ProductABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 
Protein accessionYP_003192703 
Protein GI258516481 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000374426 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTTAC ATAAAAGAAC TCTTGTCATA ATAGCAGCAT TTGCAATCTT CATAATAACG 
CCGGCCTTAT ATTTCTATTT CAACAAGCTG CATAAAACCG CAGCAGCTGA TACTCTTCCT
GTAATAGAGG ATTGCCGGTC TCTATCCGGG CTGCCGCAAT ATATTGCCAT GAAAAAAGGA
TATTTTGAAG AGCAAAATCT GAAAATTGAA CTCAAAACAG CCTCAACTTC GCAGGAATTG
CATGAAGCTG TCAAAACTAA AAAGCGCTCA ATAGTATTAT GCGGCTCAGA AACAATAGTA
AATTACCTCT CCCAAGACTC CTGCAATATG ATGGTATTTG CCGGCTTAAC AGACAGGGAA
GATTCATTTT TACTGGGAAG GCCCGATGTT TCCGAATTCA CAAAGGAAAA AGTCCGTGGT
AATTCAATTA TAGTAAGCAG CCCTGATTCA CTGCAGAGCA TGGTTTTAGA GAATATCCTG
AGAGAGAAAA AGATTTGGCC CAATTACGAG GTTAACCTGA TGCAAAATCT GCCGGACAAT
TTAAAAAGAG GCGCTTTTAA ATCCGGCACA GCCACTTTTA TAGTTTTAAC AGAACCGGAA
GCCACACTTC TGGAAACTGC CCGGGAGGCT AAAACTCTGC TTGCTTTTGC CGCAGCGGGG
GGAGAACTGC CTGCCGTGGT TCTGGCCTGC GATAAACAAT TATTATTAAG TAAACCGCAA
ACCGTACAAA AATATACTAA CGCTGTCTAT AAGGCCATCC TCTGGATAAA CTGTCACAAT
ACCGGGGATA TTGTTGCTTT AATCAAAGAA TTTTATCCGA ATACTGATCA AAAGCTCCTG
ATATCCGCTG TCAACAGGTA TAAAGATCTG TCCATATGGA CTGAGACACC GGTCATAACA
CAAAAGAGCT ACGAAAATCT TTTAAATATT ATGGAGAATT CAGGTGAGCT GACCCGCCCT
AAGAAATATA ATGATGTTAT AGATAATCGA TTTGCCACCG AAGCAGTTCA AAGTATTACC
TATACACCGG AAGAAGAGCA AAAGAAGGGA TTTTTCAACA CCATATTTAA ACATTTTAAC
TTTTGGCAGC GCTGA
 
Protein sequence
MRLHKRTLVI IAAFAIFIIT PALYFYFNKL HKTAAADTLP VIEDCRSLSG LPQYIAMKKG 
YFEEQNLKIE LKTASTSQEL HEAVKTKKRS IVLCGSETIV NYLSQDSCNM MVFAGLTDRE
DSFLLGRPDV SEFTKEKVRG NSIIVSSPDS LQSMVLENIL REKKIWPNYE VNLMQNLPDN
LKRGAFKSGT ATFIVLTEPE ATLLETAREA KTLLAFAAAG GELPAVVLAC DKQLLLSKPQ
TVQKYTNAVY KAILWINCHN TGDIVALIKE FYPNTDQKLL ISAVNRYKDL SIWTETPVIT
QKSYENLLNI MENSGELTRP KKYNDVIDNR FATEAVQSIT YTPEEEQKKG FFNTIFKHFN
FWQR