Gene Dtox_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3054 
Symbol 
ID8430048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3251021 
End bp3252214 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content35% 
IMG OID645035310 
Producthistidine kinase 
Protein accessionYP_003192429 
Protein GI258516207 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.784699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000293992 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTAATA AAATTATTCT TATCTTGAAA ATTATATTCA AGGTAATAAA AGCACTCAGA 
ATTGTATTAT CAGTTGCTTT TAAAGTTATT TCCCGTTTAC TGTACCGTGT TTACCAAATA
ATAATGGACA AACTGCGTTT CTCCATTACC TTTAAAATTA CTATAACTTA TGCATTGTTG
TTTTTATTGA TTTTTTGCCT GATGAGCGCT GGAATAATGG TTAGCTTCAG GTACTATATA
CAAAATAATA ATACGCCTGA AAACTATTTA CTTCTTCTGG GAGCTATCTT GGGTATTTTT
AATATCGTTG GTTTAATTTC CATAATTTTT TTCGGATCTA AGGCTAGCAG AAAACTCCTG
GCACCCATAA AAGTCATGAC AAGCACAGTG AAAGAAATAT CCATTAATGT GCTGGATAAA
AGGCTTGACG TCAGCGGCTC AAAGGACGAG TTGAAAGACC TGGCTAAAAC ATTTAATGAT
ATGCTTAATA GAATTCAAAA ATCTGTAGAA CAGCAAAACC AGTTTGTTTC TGATGCTTCC
CATGAACTGA GGACACCGAT TGCAGTTATT CAAGGTTACG CCGATCTTCT TGATCGTTGG
GGAAAAGATG ATTCACAGGT ACTTGAAGAG TCTATCTCGG CAATTAAGGG TGAAGCCGAA
AGTATGAAAT CCCTGGTTGA AAAGCTTTTA TTTCTTGCTA GAGGAGATAA AAATACTCAG
AGAGTTGAGA TGTCAGATTT TGCACTGAAT GAGGTTGTTA ATGAGATTTT AAAAGAAACA
AAATTAATTG ATAAAAGCCA CAACATTATA AATGATCAAA ATGAACAATT TATCATTCAC
GCGGACCCAA AACTAATTAA AGAAGCTATG AGAATTTTTA TAGACAACAG TATCAAATTC
ACCCCTGCCG GTGGTACTAT TAAGCTGAAT TCATACATTA AAAACAAAAG AGCATTTATT
AGTATTGAAG ATACAGGAAT TGGGATTTCT CAGGAAGATC TCCCTTATAT TTTTAACCGG
TTTTATCGGG CTGATAAATC AAGAAATAAG TCCAGCGGAG GCACAGGCCT GGGACTTGCC
ATTGCCAAAT GGATTATAGA CAATCATTAT GGCAAAATTG ATGTTTGGAG CGAATTAAAT
GCAGGGACGC TTGTTCGGAT TGAATTGCCG CTTTGTTTAA ACCAGGGACG ATAA
 
Protein sequence
MGNKIILILK IIFKVIKALR IVLSVAFKVI SRLLYRVYQI IMDKLRFSIT FKITITYALL 
FLLIFCLMSA GIMVSFRYYI QNNNTPENYL LLLGAILGIF NIVGLISIIF FGSKASRKLL
APIKVMTSTV KEISINVLDK RLDVSGSKDE LKDLAKTFND MLNRIQKSVE QQNQFVSDAS
HELRTPIAVI QGYADLLDRW GKDDSQVLEE SISAIKGEAE SMKSLVEKLL FLARGDKNTQ
RVEMSDFALN EVVNEILKET KLIDKSHNII NDQNEQFIIH ADPKLIKEAM RIFIDNSIKF
TPAGGTIKLN SYIKNKRAFI SIEDTGIGIS QEDLPYIFNR FYRADKSRNK SSGGTGLGLA
IAKWIIDNHY GKIDVWSELN AGTLVRIELP LCLNQGR