Gene Dtox_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3050 
Symbol 
ID8430044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3247850 
End bp3248698 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content41% 
IMG OID645035306 
Productpolysaccharide deacetylase 
Protein accessionYP_003192425 
Protein GI258516203 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0264951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00155043 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAAAGA GATTTTTGGC GATGGCTCTG TTGGCCGTGC TGGTTCTGTC CGGCGGGGCG 
ATTTGGCACT ATTGCCATTC AGATATAATT CCTATCGAAA CCGGTATTAA AGTTATGAAG
GGAGTACCCG TATTAATGTA CCACAAAGTA AATCCTGACT CAGGTGCAGG GGGGTTTGGT
TTGCGGGTCA CTCCGGAAAA CTTTGATTGG CAAATGCATT ATTTAAAGAA AAACGGTTAC
CGGTCAATCA GTTTGGGAGA TATGCTGGAT AGTTTCCAGC ATAAAAAAGC CCTGCCGAAA
AAGCCTGTAA TTATTACTTT TGATGATGGT TACCAGGATA ATTACAGGTA TGCTTATCCT
ATTTTAAAAA AATATAATTA TACGGCAACG ATATTTGTTG TTGCCGGTCT TATAGGTAAA
ACCAATGAGT TTGATGTAAA AAAACATTTG CAGCCGGAAA ATAAAATGAT GGACTGGTCT
GAAATCATAT CCCTAGATAA TGCCGGAATA ACCATAGGTT CACATACCTT AACCCACCCT
CACCTGACCG GTCTTTCCGA CGCTGAAGCC AGGCAGGAGA TTATGGTTTC CAAAAAAGTG
CTGGAGGCTA AACTGGGCAG AGAAGTTCAG TTTTTTTGCT ATCCCTATGG CGAGTATAAT
GAGTCAATGG TTAGACTGGT CAAGGAGGCC GGTTACCGTG CAGCCACCAC CACTAAGCAG
GGCTTAAACT ATCAAAATAC TGATGCCTAT CTTTTAAAGC GGATAAGGAT AATGGGAAAG
TATAATCATG AAAAATTTAT TGAGGAATTG CATAAATGGG ACTATACGGG CGAGTCTAAA
GAATTATAG
 
Protein sequence
MKKRFLAMAL LAVLVLSGGA IWHYCHSDII PIETGIKVMK GVPVLMYHKV NPDSGAGGFG 
LRVTPENFDW QMHYLKKNGY RSISLGDMLD SFQHKKALPK KPVIITFDDG YQDNYRYAYP
ILKKYNYTAT IFVVAGLIGK TNEFDVKKHL QPENKMMDWS EIISLDNAGI TIGSHTLTHP
HLTGLSDAEA RQEIMVSKKV LEAKLGREVQ FFCYPYGEYN ESMVRLVKEA GYRAATTTKQ
GLNYQNTDAY LLKRIRIMGK YNHEKFIEEL HKWDYTGESK EL