| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3036 |
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| Symbol | |
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| ID | 8430030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 3231531 |
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| End bp | 3232610 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645035292 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_003192411 |
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| Protein GI | 258516189 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0549205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAGGGATG AAAAGAAAGT AGAAAATATA AGAAGCTTGG TAGAGAAAGG CAAAAAGCAA
GGCTACCTGA CTTACCACGA GATAATGGAT GTTTTGCAAA CTACTGAACT TACGCCGGAT
CAGATTGATG ATGTTTATGA ACAGTTGTCC GGGATGGGGA TAGATCTCTT AGCCACAGAG
CCTGAAATGG ATGAGGCGGC AGTAAAACCT GATGAAGACG TTGAAGTTGA TTTGAGTGTG
CCGGAAGGTA TTGGCATTGA CGATCCGGTT AGGATGTATC TGAAGGAAAT CGGCCGGGTA
CCTTTATTGT CCTCCGAAGA AGAGGTGGAA TTGGCCAAGC GCATGGAGAT GGGCGAGGAG
GAGGCTAAGC GGCGTTTGGC TGAGGCGAAT TTACGGCTGG TGGTCAGCAT AGCCAAACGC
TATGTAGGAC GGGGCATGCT GTTTCTGGAT TTGATTCAGG AAGGCAATAT GGGTTTGATT
AAAGCAGTGG AGAAGTTTGA TTACCGCAAA GGCTATAAGT TCAGCACTTA TGCTACCTGG
TGGATCAGGC AGGCGATTAC CAGGGCGATA GCCGATCAGG CCAGAACCAT CAGAATTCCC
GTTCACATGG TGGAAACTAT CAACAAGCTG ATTAGAGTAT CCCGCCAGCT GCTTCAGGAA
TTGGGTCGTG AACCAATGCC CGAAGAAATT GCTAAGGAAA TGAACATAAC TGAAGATAAA
GTCAGGGAGA TTATGAAAAT TGCTCAGGAA CCGGTTTCCT TAGAAACTCC TATTGGTGAA
GAAGAAGATT CCCATTTGGG CGATTTTATT GAAGATCATG ATGCCCGTGC TCCTGCTGAA
GAAGCATCCT TTACCTTATT AAGGGAGCAG CTGGATGATG TGTTAAAAAC TCTTACTGAC
AGGGAGCAAA AGGTTTTAAG ACTTCGTTTT GGTTTGGATG ATGGCCGTGC CCGAACTTTG
GAAGAGGTGG GCCAAAAGTT CGGTGTAACC CGTGAGCGGA TCAGACAAAT TGAAGCTAAA
ACACTGCGCA AGCTGCGTCA TCCCAGTCGC AGTAAGAAAT TAAAAGATTA TCTGGACTAA
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| Protein sequence | MRDEKKVENI RSLVEKGKKQ GYLTYHEIMD VLQTTELTPD QIDDVYEQLS GMGIDLLATE
PEMDEAAVKP DEDVEVDLSV PEGIGIDDPV RMYLKEIGRV PLLSSEEEVE LAKRMEMGEE
EAKRRLAEAN LRLVVSIAKR YVGRGMLFLD LIQEGNMGLI KAVEKFDYRK GYKFSTYATW
WIRQAITRAI ADQARTIRIP VHMVETINKL IRVSRQLLQE LGREPMPEEI AKEMNITEDK
VREIMKIAQE PVSLETPIGE EEDSHLGDFI EDHDARAPAE EASFTLLREQ LDDVLKTLTD
REQKVLRLRF GLDDGRARTL EEVGQKFGVT RERIRQIEAK TLRKLRHPSR SKKLKDYLD
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