Gene Dtox_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2860 
Symbol 
ID8429849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3022443 
End bp3023510 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content44% 
IMG OID645035124 
Productglucose-1-phosphate thymidyltransferase 
Protein accessionYP_003192248 
Protein GI258516026 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCAC TTATTTTATC CGGCGGCAAA GGTACTCGCC TGAGGCCCCT TACCCATACT 
ATGGCAAAAC AGTTGATTCC GGTAGCTAAC AAGCCGATTC TCTATTTTGT CATTGAGGAA
ATATGCGGGG CGGGAATAAC CGATATCGGA ATAATTATTT CTCCGGAAAC AGGAGACAAG
GTGAAAGAGG CTGTCGGCAG CGGAGATCGT TGGGGAATTA ATGTTACTTA TATTTTACAG
AGGGAACCTT TAGGTTTGGC TCATGCGGTA ATAACGGCCC GTGATTTTCT GGGAACAGAT
TCGTTTTTAA TGTTTCTCGG CGATAATCTT ATTCAGGGTG GTGTCAGACA TCTGGTAGCC
GGCTTTGAAA CATCAAAAAT TGAGGCAATT ATTCAGCTTA AGGAAGTTAA AAACCCTCAG
CAGTTTGGTG TGGCCGTAAT GGGGGAGAAG GATCGAATTG TCAGGTTGGT GGAAAAACCT
AAGGACCCTC CCTCAAACTT GGCTTTAATA GGCATTTATT TATTTAAAAC AGATATATTT
GATGCTATTG ACAGGATTAA ACCTTCCTGG CGGGGGGAAT TGGAAATCAC CGACGCCATT
CAAAATTTAA TCGACGGGGG TGGTCGGGTT GAAGCCCGCC GCTTGGAGGG TTGGTGGCTG
GATACCGGTA AAAAAGATGA CATTCTAGAA GCCAACCGTG TGGTTTTGGA TGAATATACG
CGTAAGGTAA ACGAGGGCTT TATAGACAGT GACAGCAGCA TTGTAGGGAG GGTTGAGGTT
GGGCTAAACA GTAAAATTAT TAACAGTACT TTGCGTGGTC CGGTTTGCAT CGGTGAAGGA
GTAACGATCA AGGATTGCTT TATCGGTCCT TTTACTACTG TAGGGAAAAA TAGTTTTTTG
GAGAAAGTTG GGGTTGAACA TTCGGTAATC CTGGAAAACT GCCATCTGTA TAATGTTGAT
CGGATCGAAG ACAGTTTGAT TGGCTACAAT GCGCTTATTA ATAAAGGTGA CACCCGGAGG
CGGGCTATCC GTCTCTTTGT GGGCGATGAC TCACAGGTAA TGGTTTAA
 
Protein sequence
MKALILSGGK GTRLRPLTHT MAKQLIPVAN KPILYFVIEE ICGAGITDIG IIISPETGDK 
VKEAVGSGDR WGINVTYILQ REPLGLAHAV ITARDFLGTD SFLMFLGDNL IQGGVRHLVA
GFETSKIEAI IQLKEVKNPQ QFGVAVMGEK DRIVRLVEKP KDPPSNLALI GIYLFKTDIF
DAIDRIKPSW RGELEITDAI QNLIDGGGRV EARRLEGWWL DTGKKDDILE ANRVVLDEYT
RKVNEGFIDS DSSIVGRVEV GLNSKIINST LRGPVCIGEG VTIKDCFIGP FTTVGKNSFL
EKVGVEHSVI LENCHLYNVD RIEDSLIGYN ALINKGDTRR RAIRLFVGDD SQVMV