Gene Dtox_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2573 
Symbol 
ID8429559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2726228 
End bp2726713 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content32% 
IMG OID645034862 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003191989 
Protein GI258515767 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.817298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAAAA ACAAACAGCT GTTTGAAAAG TTTATTACCC AAAATATTGA TAGTGCATAT 
CGTTTTGCAT ATTCTTATGT AAAAAATCAA CAGTATGCGG AAGATGTTGT CAGCCAAAGT
GTTATTAAAG CATTATCCGC ATTGGATAGG CTGAAAAACC CTGAATTTAT GAAAAGTTGG
TTTTACAGGA TTATAATCAA CACATCAATC ACATATTTAA ATCAGAACAA GAAAAACGTT
TATATGGAAA TTGATGATTT GAATGGTTTT GACAATACAG TTGATACATA TGAGGATATT
GATTTAAAAG AAACCATAGA AAGGCTGCCT TTAAAATACC GGAGTATTAT CATACTTCGT
TATTTTGAGG AGTTTTCCCT GAATGAAATT GCAACGATGC TTGATGAAAA TCTAAACACT
GTCAAAACCA GGCTGTACAA AGCCCTTAAA ATTCTCAAAT TGGAAATGGA TGAGGTGGAT
TTATGA
 
Protein sequence
MQKNKQLFEK FITQNIDSAY RFAYSYVKNQ QYAEDVVSQS VIKALSALDR LKNPEFMKSW 
FYRIIINTSI TYLNQNKKNV YMEIDDLNGF DNTVDTYEDI DLKETIERLP LKYRSIIILR
YFEEFSLNEI ATMLDENLNT VKTRLYKALK ILKLEMDEVD L