| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2516 |
|---|
| Symbol | |
|---|
| ID | 8429502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 2678104 |
|---|
| End bp | 2679918 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 645034816 |
|---|
| Product | Transposase-like protein |
|---|
| Protein accession | YP_003191943 |
|---|
| Protein GI | 258515721 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5421] Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0178846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTAC AACCTATTTT AGAACAACTA GCCAAATTAC CCCCCGAAAT ATTGATGAAG
ATAATGCCCG AATTAAAAGT AGAAGTTCCG AAGGCAGATC CCTCAGGTGC AGTACTTATC
GGTGTCTTTT TAGCAAGAAG CCTGGGCATC GGTAAAATAA TTGACAACTT TATAGGCGAA
GAATATGTTA CTTATGAGCA TCTACGTGAA GACAGAGCCA ACGGTTCTAA ATGTCGGGTA
AGTACTGGTT TGGCATGTGA AATAATGGTT GGCGACATGC TGGGCAGAAA TAAAGATCTC
ACCCGTTTAT ATAAATTTGA AGAAGCTTGT GAAAACTGGC AAGTCGAAAC AATACTTGGT
ATACCATCCG AAAAATTTAA TGATGACAAA ATGGGTAGAG CCCTTGACGC TATAAACTCA
AATGCAAAAT ATATGGCTAA TGTATTGCAG GATATTGTTT TATCAGCATC CAAGAGATTT
GGAATCCCAC TTAACACTTT TTACAATGAT ACATCTTCCG TTCCAGTCTC TGGTGTTATG
GAGGATAACG ATAAAGTTCA ATTCGGGTAC GGTGGTCTAC CGGGTTTAAA ACAATTAATC
CTCAATCTTA CTATAGCCTC TGGTGCATCT TTGCCGGTAA CATCATCAAT TGATCCCGGT
AATGTTCAAG GTGGCACGAC TTTTGAGCGT TCATTCGAGA AGGTTAAAGA GATTACCGAT
GACCAAGAAT TTGAGATGAT TATTGATCGT GGTATCCTAA CCCAAGATAA TATGCATTTG
ATGCTTACTA ATAGCAACAA AAAGGCCTTT TTTATAGGCC CACTCAAGGA TGAACTATCG
AAAAATTGGG TCTTAGAGCA ATTAAATGAG GCTAAAAAAG ATGATTTTGC TACTATTGAC
TATCGCTCTA AGAAAGAAAT AGAAAGAAAT CTATCCAGAC ACTACGAGGC ATTAGAGACA
AAATATACGT TTAAGGTAAA ACTTGATCCT CCCTCAGAGG GTAGTAAGAA CAAAAAGCAA
CTCAAAAAAA GTAAGCGAAT ATTTGCGACC CATACCATAA GGGCGGTTAT TTATTGCGAT
TTAAACAAAA AACCTAAGGA ACAAGAGCGT CGTCAAAAGC GTATAACCAG CACAGAAGAT
GCATTAGTAG AACTCAATGG CAAGCTCAAC AAACGTAACT TAATCACGAA GGAAGCCTGT
GAAAAAGTAG TAGATAATAT TTTTAAAGGG CAGCCTGATA TGCGTAGGCT GTTTAATGTA
ACAATTAAAC TAAATCAACA TAATGCCATT GTTATGTCCT GGTCAAAAGA TGAAGCTATA
ATTCCAGAGC TTGAGAAAAC CGATGGTATC TTTGTGCTTT TAACCAACCA CGACAAAGAG
AAGGTTGATG CTAACGAACT GCTTACCCGC TATCGTGGTA GGAATGATAT CGAAATTAGT
TTTAGGTTTT TGAAGGGTTC TCTTGATTTA CAACAAATAT TCCTTCGCAA TCCTGAAAGA
GTAGATGCCT ATTGCTTTTT AAAAGTATTG GCTATGCTTG TGCTTAATTT AGCAGCCTGG
CTGTTAGCTA AAAATGGCAA AAAGATGTCT CCCCAAAAAT TACAGAAAGA ACTTGGCGAC
CTAACTATCT CAGAACAAAG GTTGCAGCCT ATTGGTATAA GCCATTGGAA TGGGACGAAT
ATTCCTAATA CCATTGATGT ATTGGTTAAC CTGTTTAACT TACCACATCC ACTTGAATTA
ATAGAGGTTA TTAATTCAGC AATCAATTTT TCTTATCATA TTGAGAAATG GTTTAAGGAT
AATTTAAGAA AATAA
|
|---|
| Protein sequence | MDLQPILEQL AKLPPEILMK IMPELKVEVP KADPSGAVLI GVFLARSLGI GKIIDNFIGE
EYVTYEHLRE DRANGSKCRV STGLACEIMV GDMLGRNKDL TRLYKFEEAC ENWQVETILG
IPSEKFNDDK MGRALDAINS NAKYMANVLQ DIVLSASKRF GIPLNTFYND TSSVPVSGVM
EDNDKVQFGY GGLPGLKQLI LNLTIASGAS LPVTSSIDPG NVQGGTTFER SFEKVKEITD
DQEFEMIIDR GILTQDNMHL MLTNSNKKAF FIGPLKDELS KNWVLEQLNE AKKDDFATID
YRSKKEIERN LSRHYEALET KYTFKVKLDP PSEGSKNKKQ LKKSKRIFAT HTIRAVIYCD
LNKKPKEQER RQKRITSTED ALVELNGKLN KRNLITKEAC EKVVDNIFKG QPDMRRLFNV
TIKLNQHNAI VMSWSKDEAI IPELEKTDGI FVLLTNHDKE KVDANELLTR YRGRNDIEIS
FRFLKGSLDL QQIFLRNPER VDAYCFLKVL AMLVLNLAAW LLAKNGKKMS PQKLQKELGD
LTISEQRLQP IGISHWNGTN IPNTIDVLVN LFNLPHPLEL IEVINSAINF SYHIEKWFKD
NLRK
|
|---|
| |