| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2389 |
|---|
| Symbol | |
|---|
| ID | 8429373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 2561099 |
|---|
| End bp | 2563282 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 645034694 |
|---|
| Product | penicillin-binding protein, 1A family |
|---|
| Protein accession | YP_003191823 |
|---|
| Protein GI | 258515601 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.390791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.221681 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGGAAA ACGAGAAGAA AAAGAAGCTT AACTGGTTCC GACTCTTCTT ATTAATTGGT
CTGCTGGTTC TGCTCATTGT GCTGGGTACC TCCATAGGCT TGCTTATCTC TATAATTGTG
GATTTACCTG ATATAAATAT AAAAGATTTG AAATACAATG CAGCAACACT TATTTATGAT
CAGAATGATA ATTTGATTAC TAAAATTGGC ACAGAAAATC GTATCCCGGT TAAAATAAAT
GAAGTGCCCA AAGTTGTACA AAACGCTTTT CTGGCTGTAG AAGATGTTCG CTTTTACCAG
CACCACGGTA TAGATATACG AGGAATTGCC AGAGCGGCCT GGCAAAACAT AACCACAGGA
AAAATTAAGG AAGGTGCCAG CACTATAACA CAGCAGCTGG CGCGCGATAT ATATTTGAAT
AATGATCAGA AATACAAACG AAAAATTCAG GAAATTTTTT TGGCCTTAAT GCTTGAGCGA
AAATTAAGTA AGGAAGAGAT ATTAGAATTA TATTTAAACC GTATCTATTT TGGTGAAGGC
TCTTACGGCA TTAAAACTGC TGCGGAAACA TACTTTGGTA AAAAATTAAA TGAATTAGGG
TTAAAAGAGG CTGCCTTACT GGCGGGTTTG CCACAAGCGC CCAGTTCTTA CTCACCTTAT
CAAAATAAAG ACCTGGCTTT AAAGAGGCGT AACCTTGTTT TGGAAAATAT GCTTAAATAT
AATTATATTA ACAATTATGA TTACAACAAT GTTGTTAACG CTGATTTAGG AACTCTGACA
GAACCCGCTG CCAAAAAATA TCCCTATCCT TTTTATATTG ACTATGTAAC TGAACATTTA
ATAGCCAGGT ACGGTGAGTC TCAAGTATTT ACAGGCGGGC TGATAGTTCA TATTGCTATG
GATAAAAAAA TGCAAACTAT AGCAGAGGAA GTTATATCAA ACAAAAACAA TTTCCCTACC
GCGGATATTC AAGGCGCGGC AGTGGTTATA AATCCTCATA ACGGATATAT AACTGCACTG
GTGGGCGGAC GGGAACACAC TAACATGCGG CAGTGGAACA GAGCTACCCA AACCTACCGC
CAGCCTGGTT CGGCTTTTAA ACCTATTATA GCTTACGGAC CCGCTATCGA GTTAAAAGGT
AAGGGACCGG CATCAGTAGT AGACGACTCT CCTATTAGAA TTGGCAGCTG GTCACCACGC
AATTCCAACG GTAAATTTAG TGGTTTAACT ACTTTGCGAA ATGCCCTGAC TTATTCGATA
AATATCGTAT CAGTTAAACT TTTACAGGAG GTTACTATTC CAAAAGCCAG GGACTTTGCA
AAAAAGATAG GTATTTCATC GCTTGATCCT AAATATGATG TTGGATTAAG TATGGCTTTA
GGTGGGCTGC ACCAGGGTGT AACCCCACTG GAACTGGCTG GGGCTTATGG CGCCTTTGCA
AACCTTGGCA CTTATAATAA GCCCATAGCT ATCACTCAGG TTAAAAAATC TGACGGCACC
GTCCTTTGGG ATACGCAACA AAGCATACCG GTTCAAGCTA TGAAACCAAC TACAGCTTAT
TTAATAACTG ATATGCTCCA ATCAGCCGTA CAAAGGGGCA CGGGGACGGC TGCTCAAATA
AGCAGGCCTG CTGCAGGCAA AACAGGCACA ACTGAAAACG GTAAAGACAT ATGGTTTGCC
GGTTATACTC CGGAACTTGT AGGTATCGTT TGGATGGGTT ATGATGATCC TAAACCAACA
CCATACTTCG GCGGCGAATA TTCCGCCAGA ATATGGCATA ATATCATGGG GAAAATTCTT
GAAGGACAGC CACTTAAACA GTTCCCCCGT CCTGATAACA TAGTTTCCGC CACAGTGGAC
AGCAAGTCCG GGCTTTTGCC CGGACCCAAT ACCCCTGATA CAGACAAAGT TACAGATCTT
TTTGCGGCTG AAAATGTACC AAAAAAAGTC GATACTTCTC ATGTGTTGGT AGAAGTGTGT
GCTGTTTCCG GAATGCTGCC AAATGAATAC TGCCCGGATA GAGTAACAAA AGTATTTTTA
AAGACCGGTA CATTTTCCTC CAGTGTTGCA GACAGTGAAA GCAGAGTACC GACAGGTGTT
TGTACCGTGC ACGGGCCTGA AACAAGCAAT AAGGAAGTGG AAGCGGAAAC ACATAATATA
ACACCTCAAG GAAAAACCAA TTAA
|
|---|
| Protein sequence | MTENEKKKKL NWFRLFLLIG LLVLLIVLGT SIGLLISIIV DLPDINIKDL KYNAATLIYD
QNDNLITKIG TENRIPVKIN EVPKVVQNAF LAVEDVRFYQ HHGIDIRGIA RAAWQNITTG
KIKEGASTIT QQLARDIYLN NDQKYKRKIQ EIFLALMLER KLSKEEILEL YLNRIYFGEG
SYGIKTAAET YFGKKLNELG LKEAALLAGL PQAPSSYSPY QNKDLALKRR NLVLENMLKY
NYINNYDYNN VVNADLGTLT EPAAKKYPYP FYIDYVTEHL IARYGESQVF TGGLIVHIAM
DKKMQTIAEE VISNKNNFPT ADIQGAAVVI NPHNGYITAL VGGREHTNMR QWNRATQTYR
QPGSAFKPII AYGPAIELKG KGPASVVDDS PIRIGSWSPR NSNGKFSGLT TLRNALTYSI
NIVSVKLLQE VTIPKARDFA KKIGISSLDP KYDVGLSMAL GGLHQGVTPL ELAGAYGAFA
NLGTYNKPIA ITQVKKSDGT VLWDTQQSIP VQAMKPTTAY LITDMLQSAV QRGTGTAAQI
SRPAAGKTGT TENGKDIWFA GYTPELVGIV WMGYDDPKPT PYFGGEYSAR IWHNIMGKIL
EGQPLKQFPR PDNIVSATVD SKSGLLPGPN TPDTDKVTDL FAAENVPKKV DTSHVLVEVC
AVSGMLPNEY CPDRVTKVFL KTGTFSSSVA DSESRVPTGV CTVHGPETSN KEVEAETHNI
TPQGKTN
|
|---|
| |