Gene Dtox_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2313 
Symbol 
ID8429297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2482236 
End bp2483174 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content48% 
IMG OID645034620 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_003191749 
Protein GI258515527 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.490925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0006759 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACTG TTTTTATGGG CAGCCCGGAT TTTGCCGTAC CTTCTCTGGA AAAACTATAT 
AAAATGGGCT TTGATATCGC AGGTGTGGTG ACCCAACCTG ACCGGCCCAA AGGCAGGGGT
AAAAAATTGC TGCCGACTCC GGTAAAAATA TTTGCCCAGT CTGCCGGATT AAAAATATTT
CAACCTGAAA AGATAAAAAC ACCGGAATTT ATCCGGCTGC TTAGAAATTT AAGTCCTCAG
GTAATAGTTG TGGTAGCCTT CGGCCAGCTG CTCTCACCGG AGCTGCTGCA AATACCGCAA
TTCGGCTGTA TTAACGTACA TGCCTCCTTG CTGCCTAAAT ACCGTGGTGC TGCACCAATT
CACCGGGCAG TGATCAACGG AGAAAAAGTT ACAGGTGTAA CCACTATGTA TATGGACGAA
GGTCTGGATA CGGGTGATAT GATACTCAGT CAAGAACTGC CGGTAGAAAA ACAGGATACT
GTGGGCATGG TTCATGATCG CTTGGCTGTC CTGGGAGCTG AGGTCTTGGA GAGGACTTTA
CAACTGGTGG ATGATGGCGA GGCCCCCCGG CAGAAACAGC AGGACAGCAG TGCCACCTAT
GCGCCGCTAT TAACCAAAGC AGATGAAATC ATTAACTGGC ACAGCAGTGC CAGAGAAATC
TGCAATCATA TCCGGGGAAT GAACCCCTGG CCGGGAACCT GTACTTATCT GGATGGCCAG
GTAATAAAAA TTTGGCAGGC AACGTACGGG AAGAGGCTGG TTGATGCAAT AGGATTACCC
GGACAGGTTA TGGCATCAGA TGCGGGGGGA ATTATCATTC AGGCCGGCCA GGATCAGGTT
TGTATTAAAG AACTGCAGTT ACAGTGCTGC AAGAGAATGA TGACGGCTGA TTTTTTAAGA
GGCAAACAAA TTCCGGAAGG AAGGTGTCTG GGGGACTGA
 
Protein sequence
MKTVFMGSPD FAVPSLEKLY KMGFDIAGVV TQPDRPKGRG KKLLPTPVKI FAQSAGLKIF 
QPEKIKTPEF IRLLRNLSPQ VIVVVAFGQL LSPELLQIPQ FGCINVHASL LPKYRGAAPI
HRAVINGEKV TGVTTMYMDE GLDTGDMILS QELPVEKQDT VGMVHDRLAV LGAEVLERTL
QLVDDGEAPR QKQQDSSATY APLLTKADEI INWHSSAREI CNHIRGMNPW PGTCTYLDGQ
VIKIWQATYG KRLVDAIGLP GQVMASDAGG IIIQAGQDQV CIKELQLQCC KRMMTADFLR
GKQIPEGRCL GD