Gene Dtox_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2304 
Symbol 
ID8429288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2472363 
End bp2474261 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content44% 
IMG OID645034611 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_003191740 
Protein GI258515518 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.171539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000365426 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGGTA AACGTTTGGG AGACCGGTTT GAAATCATTG AACAACTTGG CGGCGGGGGA 
ATGGCTGTAG TTTATAAGGG CAGGGATACT CTCTTGCACC GCCTGGTAAC TATTAAAGTA
CTAAGACCGG AGTTTGCCTC GGATGAAGAA TTTGTAAAAA GTTTTCGCCG GGAAGCACGG
GCTATCGCCA GCCTGTCTCA TCCCAACATT GTGAATATTC ATGATGTTGG ACAGGAAGAT
CATATTCAAT ACCTGGTTAT GGAGTATATA GACGGGGATA ACTTGAAAAA TCTCATAAAA
AAGATGGGGG CCCTGTCCAC GCATCAGGCA GTACAGATTG CTTTGCAGGT ATGCGCCGCT
TTGGAGCACG CGCATGAGAA CAATATTGTT CACCGCGATG TTAAACCGCA TAACATACTT
ATAACAAACA ACGGTAAAGC CAAGTTAACC GATTTCGGTA TTGCCGCTGA GACCACGGCT
GCCACTATGA CACATACAGA CACGATTGTT GGTTCAGTAC ATTATCTGTC GCCTGAACAG
GCGCAGGGTG AAGAAGCGGG CAGCAAATCG GACATTTACT CGCTTGGCGT AGTGCTGTAT
GAAATGCTTA CCGGTACTCT CCCCTTCACC GGTGACAATC CTATTGCTAT TGCTTTAAAA
CATATTAAAG ATGTGCCTGT GCCTTTAAGA AACATCAAAC CTGATATTTC AAATAAACTT
CAAGATGTAG TTTTAAAGGC CATCAGTAAA AATCCGGAAC ACCGGCAGTC TTCTGCCAGG
GAGTTGGCTC TGGAACTTCA GGCAGCAGAA ACAACTCTGC CCGCAAAAAC CGGTGACCTG
GACGCAACAC TGATTATACC GGTTGATGAT TTTAATACCA GACTCATACC TGTGACAAAA
GTCAGGTCAA CCGGTGCAAA AGATTCCGGA GAAAATCATA ATAGCGTCAT TACGTCTCAA
AATAAAAGTA AACGTCCTCT GACTTGGGTT GCTGTTATAT TAGTTTTAAT AGGTCTGGCC
ATTGGTGGGA CGCTGGTTTT TCGCAATATT TTGACTGTGC CGGACGTTAC ACTTATTGAT
GTAACAAACG ATACTGCCAA TGAAGCCATT ACGCGCCTGA ATCAAGCCGG TTTTCCGGAT
GTCAGGACCG AAGAAAAATA TGATTTAAAA GAAAAAGGGA AAGTGGTTTC GCAAAATCCC
GCCCCCAATA CAATCGTGAA AAAAGGCCGT ACGATCCTAT TGTATATCAG CAAAGGACCT
GAAATGAAGA CAGTGCCTAA TCTGCTTGGT AAGAGCAGGC AAGAGGCTTC CATAGAAATC
AGCAATAAAG GTTTTGTCAT GGCGGAAAGT GATCCTGTAT TCAGCAGTGA TATTGAGAAA
GATAAAGTAG CGGTGCAATC ACCTTTAGCG AATCAAACCG CTGCAATGGG CAGTAAAATA
TCTGTATCCT TTAGCAAGGG ACCTCAAATA ATCACGCATG AAATGCCAAA TCTGATAGGA
AAGAATCTGG ATGAGGCACA AAGCCAGCTG CAGCAGCTTA AATTAAACTC GACAGATGGT
ATTACCCGCC AATCCAGTGA TCAATACCTG CCAGACCAGG TAATAACACA GACTCCGACT
CAAGGAAGCA GTGTACAGGA AGGATCTTCC GTGTCTTTGG TGGTTAGCAA TGGCCCGGGA
CCCACACCTA AAGATGCTAC CGTGGAATTT AAGGTAACCA ACGACGGTAA GGAGCATAAT
GTTAGGATAC AAGTAACAGA CATTCGCGGC ACAAAAGAAC CCTATAACGC TGTACACGCA
TCTGGAGAAG CTGTATCAAA AACGGTACGT TATTACGGCA AAGCCAATAT TATAGTTTAT
ATAGATGATA TCAATGTTTT TGAAAAATCT ATGGATTAG
 
Protein sequence
MIGKRLGDRF EIIEQLGGGG MAVVYKGRDT LLHRLVTIKV LRPEFASDEE FVKSFRREAR 
AIASLSHPNI VNIHDVGQED HIQYLVMEYI DGDNLKNLIK KMGALSTHQA VQIALQVCAA
LEHAHENNIV HRDVKPHNIL ITNNGKAKLT DFGIAAETTA ATMTHTDTIV GSVHYLSPEQ
AQGEEAGSKS DIYSLGVVLY EMLTGTLPFT GDNPIAIALK HIKDVPVPLR NIKPDISNKL
QDVVLKAISK NPEHRQSSAR ELALELQAAE TTLPAKTGDL DATLIIPVDD FNTRLIPVTK
VRSTGAKDSG ENHNSVITSQ NKSKRPLTWV AVILVLIGLA IGGTLVFRNI LTVPDVTLID
VTNDTANEAI TRLNQAGFPD VRTEEKYDLK EKGKVVSQNP APNTIVKKGR TILLYISKGP
EMKTVPNLLG KSRQEASIEI SNKGFVMAES DPVFSSDIEK DKVAVQSPLA NQTAAMGSKI
SVSFSKGPQI ITHEMPNLIG KNLDEAQSQL QQLKLNSTDG ITRQSSDQYL PDQVITQTPT
QGSSVQEGSS VSLVVSNGPG PTPKDATVEF KVTNDGKEHN VRIQVTDIRG TKEPYNAVHA
SGEAVSKTVR YYGKANIIVY IDDINVFEKS MD