| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2287 |
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| Symbol | |
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| ID | 8429271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | - |
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| Start bp | 2454226 |
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| End bp | 2456409 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645034595 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003191724 |
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| Protein GI | 258515502 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.421652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000120051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATAAAC TGATTCAAAA ATTAATTAAT TACAACCCGA AAGCCGATAT AGCATTTCTC
CGTAAAGCTT ACAATGTTGC CGAAGCTGCT CACCGCAACC AATGGAGAAT TTCCGGTGAA
CCTTATATAT TTCATCCCTT GGCAGTAGCT AAAATATTGG CTGATCTGGA GTTAGACATA
GAAGCCCTGG CTGGAGCATT GCTCCATGAT GTGGTGGAGG ATACCGAAAT AACTCTGCAA
GATATAGAAA AGGATTTTGG TTCAGAAGTT GCCTTGCTTG TTGACGGAGT AACCAAATTG
AGCAAGATTG ATTTTAAATC GAAGGAAGAG CACCAGGCTG AAAACCTGCG TAAAATGTTT
TTAGCTATGG CCAAAGATAT CAGAGTTATT TTAATTAAGC TCGCAGATCG CCTGCACAAT
TTACGCACAC TTGGAGCTCA GCCCGAAGCT AAGCAAAAGG AAATTGCTTT AGAAACCCTG
GAGATATTTG CTCCTCTGGC ACATCGCTTA GGAATTTACC ATTTAAAATG GGAGATAGAG
GATCTGGCTT TTCGTTTTTT GCAACCATCA AAATATTATG AACTGGCGGA CAAGGTTGCA
AAAACACGAA ATAAACGAGA AGAAGACATA AATGAAATTA TTGAGGTACT AAAAAAGAAG
TTCATAGATG TTGGTATTAA AGCCGATATT CAGGGCAGAC CAAAACACCT CTACAGTATT
TACGAAAAAA TGCAGAGACA GAAGAAAGAT TTTGCGCAGA TTCTTGATAT TATGGCTGTT
CGGGTTACTG TAGATACCGT GAAGGATTGT TACGGCACCC TGGGTATTGT GCATACCCTT
TGGAAGCCCA TACCCGGCAG GTTTAAGGAT TACATAGCCA TGCCCAAATC GAACATGTAC
CAGTCCCTGC ACACTACTGT GATAGGTCCT CATGGTGATC CTTTTGAGAT TCAAATGCGC
ACATGGGAAA TGCACCGGAC GGCTGAGTAC GGTATTGCTG CGCACTGGTG TTATAAAGAA
GGCGGGCATG CTCAGAAAGG CTTTGACGGT AAACTAATCT GGCTGCGCCA GCTTTTAGAG
TGGCAGCACG ACATGCGTGA TGCCAAAGAA TTTATTGAAG GTTTAAAAAT AGATATATTT
GCTGAATCAG TTTTTGTCTT CAGTCCCAAA GGTGATATTA TTGAACTGCC GGCAGAAGCG
GTACCGATTG ATTTTGCTTT TCGCATTCAT ACAGATGTGG GCAACCGGTG TATGGGGGCT
AAGGTCAATG GTCGCATTGT TCCCCTGGAC TATAAGCTTA AAAATGGTGA TATTGTTGAG
GTCTTGACAT CCAATCATGC TCGTCCCAGC AGGGATTGGC TTAAGATTGT CAAAACCTCA
CAGGCTAAAA ACCGTATTCG TCAGTATTTT CGCAAAATCC AGAGAGATGT CTCTGTCATT
AAAGGAAAAG ATGCTATAGA ACGGGAAGCC AAAAAACTGG GTCTAGAGTT GGAGTTGCTG
AAAAGCGACA AAATTATTGA GGCAGCCCGT AAATATTCAC TTATTAATTT GGAAGATGTT
TATGCCGCAA TCGGTGACGG GACTATTACG GCCAGATCTA TTGTAGCCCG TATTAAGGGT
GAGATCGACC GGATTAATAA AGAAAACGCT TATACGGATA TGATGAATTC CGGTGGTTCC
GGCGTATCAG TGGTGGGTGG CAGGGAGAAA TACGGAAAGT GGCAAAAACC CACCGATGGC
ATAAAGGTAA AAGGGATGGC TAATTTGCTG ACAAAATTAG CCCAGTGCTG CAATCCGGTT
CCCGGTGATC CGATAATCGG CTATATTACA AGGGGCAGAG GAATATCAGT GCACAGGACT
GATTGTCGAA ACATTACTAT TTATAGAAAA GGCGAACAGG AGCGTTTGGT AGATGTGGCC
TGGGATGAAA AGTACAAGGC TCCTTTTCAG GTAAAGCTGG AGGTTACGGC TCTGGACAGG
GCCGGCTTAT TAAGTGATAT TATGGCCATC TTGACTGATA TGAAAATTAG TGCTGACTGG
GTTAACGCCA GGGGCAACAA AGACAGGCTG GCTACTGTAG GGCTTTTGAT AACCATTAAA
GATTTGGTTC AACTGGACTC AATTATTAAT AAAATAAAAT CTGTAAAAGA TGTGACAGAG
GTAAGCCGTA CGGGTCTTAA ATAA
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| Protein sequence | MDKLIQKLIN YNPKADIAFL RKAYNVAEAA HRNQWRISGE PYIFHPLAVA KILADLELDI
EALAGALLHD VVEDTEITLQ DIEKDFGSEV ALLVDGVTKL SKIDFKSKEE HQAENLRKMF
LAMAKDIRVI LIKLADRLHN LRTLGAQPEA KQKEIALETL EIFAPLAHRL GIYHLKWEIE
DLAFRFLQPS KYYELADKVA KTRNKREEDI NEIIEVLKKK FIDVGIKADI QGRPKHLYSI
YEKMQRQKKD FAQILDIMAV RVTVDTVKDC YGTLGIVHTL WKPIPGRFKD YIAMPKSNMY
QSLHTTVIGP HGDPFEIQMR TWEMHRTAEY GIAAHWCYKE GGHAQKGFDG KLIWLRQLLE
WQHDMRDAKE FIEGLKIDIF AESVFVFSPK GDIIELPAEA VPIDFAFRIH TDVGNRCMGA
KVNGRIVPLD YKLKNGDIVE VLTSNHARPS RDWLKIVKTS QAKNRIRQYF RKIQRDVSVI
KGKDAIEREA KKLGLELELL KSDKIIEAAR KYSLINLEDV YAAIGDGTIT ARSIVARIKG
EIDRINKENA YTDMMNSGGS GVSVVGGREK YGKWQKPTDG IKVKGMANLL TKLAQCCNPV
PGDPIIGYIT RGRGISVHRT DCRNITIYRK GEQERLVDVA WDEKYKAPFQ VKLEVTALDR
AGLLSDIMAI LTDMKISADW VNARGNKDRL ATVGLLITIK DLVQLDSIIN KIKSVKDVTE
VSRTGLK
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