Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2095 |
Symbol | |
ID | 8429077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 2273031 |
End bp | 2273825 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645034416 |
Product | pseudouridine synthase |
Protein accession | YP_003191547 |
Protein GI | 258515325 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.965704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGT CTCGGACAGG CAATGTACAA AAGGAAAGAC TTCAGAAAGT TATGGCACGG GCAGGCATTG CTTCCCGTCG CAAGTGTGAG GAGTTAATTG CGGAAGGTGT TGTTAAAGTT AACGGGCGAC TGGTTAAGGA ACAGGGGATT AAGGTTGATC CGCAAAAGGA TAGAATAATG GTGCAAGGAA AAATAATTAA CCGTTTGGAA GATAAGATAT ATCTTCTTAT GTATAAGCCA CGAGGCTATG TGACTACCCT GCACGACCCG GAAGGAAGAA AGACTATTGT CGATTTACTC AAAAATATAA AGGAACGTGT TTTTCCCGTG GGACGGCTTG ATTATGACAG TGAGGGACTT CTCCTGGTAA CCAATGACGG AGAACTGGCC AATGCGCTGA CACACCCCAG ACATGAAGTT AAGAAAACTT ACCTGGTCAC TGTAGCCGGC ATACCCTTGC CAAAATCATT GGAGCAGATG TCGAAAGGTT TGGAATTGGA AGATGGTATG ACTGCTCCCA CCCAGGTTGC GCTGGTTGAA TTATTAGAAG ACAGAAGTCT ATTGGAAATA ACCGTGCATG AGGGGAAAAA CCGGCTTGTG CGCCGTATGT GTGAGAAAAT TGGTCACCCG GTACTCAGAC TGAAAAGAAT TAAATTAGGC ACACTTAGTA TTAAAGGAGT AAAACCGGGT CAATATCGTT TATTAAATAC TAAAGAAATT CGTGAATTAA AAAAGTCAGC AGGTTTGATA GTACAAGCAC GAACGACAAA ATATAAACCC AAGCATATAA ATTAG
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Protein sequence | MNKSRTGNVQ KERLQKVMAR AGIASRRKCE ELIAEGVVKV NGRLVKEQGI KVDPQKDRIM VQGKIINRLE DKIYLLMYKP RGYVTTLHDP EGRKTIVDLL KNIKERVFPV GRLDYDSEGL LLVTNDGELA NALTHPRHEV KKTYLVTVAG IPLPKSLEQM SKGLELEDGM TAPTQVALVE LLEDRSLLEI TVHEGKNRLV RRMCEKIGHP VLRLKRIKLG TLSIKGVKPG QYRLLNTKEI RELKKSAGLI VQARTTKYKP KHIN
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