Gene Dtox_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2053 
Symbol 
ID8429035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2231105 
End bp2232298 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content43% 
IMG OID645034374 
Productphosphopentomutase 
Protein accessionYP_003191505 
Protein GI258515283 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1015] Phosphopentomutase 
TIGRFAM ID[TIGR01696] phosphopentomutase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACAGAA GAGTATTATT AATAGTATTA GACAGTGTAG GTATTGGTGA ATTGTCTGAT 
GCCGGGCTTT ATGGTGATAA CGGGAGCAAT ACACTGGCTA ATATTGCGCA GGCTGTCAAT
GGGCTGAATC TTCCTAACTT AGCTGCCATG GGTTTGGGTA ATATTGCTGA TATTCAGGGC
GTTCTGCCCG CAGCGTTACC TTCTGGCGCT TACGGTAAAA TGGCTGAAAA ATCAAAAGGC
AAAGATACCA CCACGGGACA CTGGGAATTA GCAGGGTTAA TTCTGGAAAA AGCTTTTCCT
GTTTACCCGC AAGGTTTTCC GCCTGAAATT ATCAATGAAT TTGAGCGACT TATTGGTCGC
CCTGTTCTGG GTAATAAAGT TGCTTCCGGT ACAGAAATTA TTGAAGAGTT GGGCGAAGAG
CACATGAAGA CCGGTTACCC TATTGTTTAC ACTTCAGCGG ACAGCGTGTT TCAAATAGCT
GCGCATGAAG AGACAATCAG GCTTGATGAA TTGTATCGGA TGTGTAAAAC TGCCAGAAAC
TTGTTGACTG GCGAGCATGC TGTAGGAAGG GTTATAGCCA GACCATTTAT TGGCCAGCCG
GGTAGTTTTG AACGAACAGC CAACAGGCAT GATTATTCGC TCAAGCCTCC CAGGAAGACT
ATTTTGAACT TACTGAATGA AAAGGGAATA ATTGTTACCG GAGTTGGCAA GATTCATGAT
ATATTTGCCG GCGAGGGTAT CAACCGGTCA ATACATATTG AAGGAAATAT GGACGGAGTG
GATAAGATTA TTGACTTGCT GGGTGAAGAT TCAAGCGGGT TGATTTTTGC CAATCTGGTA
GATTTTGATT CAAAATACGG TCACCGCAAT GATCCTAAAG GCTATGCAGC TGCTCTGGAG
GCTTTTGACA GCCGGCTGCC GGAAATTACT TCAAGAATGC GTAAAAGTGA TATTTTGATT
ATCACAGCTG ATCATGGTTG TGATCCTACT ACAAAAGGTA CTGATCATAC CAGAGAATTT
ATTCCCCTGC TGGTATTTGG ACAGGATATT AAATCGGTCA ATCTGGGGGT AAGAGCTTGC
TTTAGCGATA TGGCAGCAAC TTTAGGGGAA TTATGGGATA TTAAATATCC TGAAGGAAAG
AGCTTCTGGC AAGAGTTAAG GAAAGAAGGA GCACAGTCAG ATGAGAATGT ATGA
 
Protein sequence
MHRRVLLIVL DSVGIGELSD AGLYGDNGSN TLANIAQAVN GLNLPNLAAM GLGNIADIQG 
VLPAALPSGA YGKMAEKSKG KDTTTGHWEL AGLILEKAFP VYPQGFPPEI INEFERLIGR
PVLGNKVASG TEIIEELGEE HMKTGYPIVY TSADSVFQIA AHEETIRLDE LYRMCKTARN
LLTGEHAVGR VIARPFIGQP GSFERTANRH DYSLKPPRKT ILNLLNEKGI IVTGVGKIHD
IFAGEGINRS IHIEGNMDGV DKIIDLLGED SSGLIFANLV DFDSKYGHRN DPKGYAAALE
AFDSRLPEIT SRMRKSDILI ITADHGCDPT TKGTDHTREF IPLLVFGQDI KSVNLGVRAC
FSDMAATLGE LWDIKYPEGK SFWQELRKEG AQSDENV