Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1949 |
Symbol | |
ID | 8428931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2068840 |
End bp | 2071161 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645034279 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003191410 |
Protein GI | 258515188 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGTG TTAAAAACAC CTACAGGGTC TTTAAGGAAA TACTCATGTC TAACACAGGT AACATTTTGC TGCGCCAGTC TGCTAAACAA AAACTTCTCA CTGAAAAGTT TGCCTGTCAT ATATCCAGAG GCAAAATTAT AGGAGTAATG TATCTGGACA TCGTACGTTT TCATGAAGTT CAGCAAATAC ACGGCTCCAT TATGGTTGAT CGAGTCCTAA ATCTCTTAGA GGAATCGCTG AAAAAAATAA TAACCAAGTT CTTACCGGAT GATTCTGTTC TGGCAGTGGA AAACTTATGG GCGGACGATT TTGTTATCTT ATTCACTCTT TCCGATAAGA CTTCCACGGA GGAATTATCA AACCTGGCGG TGGCTTTACG CTTATCACTC AGGGATAACT TAAGCTTTCA ATTTATAAAG TTGCTTGGCA GTGAACTGGA ACTGCATATA GGCTACGCCA TTATTGAACC TGCTGCTGAC ATTAAACACG ATATAAAATT ATATAATGCT CTACGCGAAG CGCAGAAGGT AGCCAAGGGA ACTCTAAGCC TGGGCACTAT AAACCTGGCT AAAAAATTTA AGGAGCTTTT ATCTAACCAT GAACTGAGGT CGGTATACCA ACCCATTGTT TCTCTCTCTT CGGGGGAAAT TTTAGGTTGG GAAGCCCTTA CACGAGGACC GGAAAACTCT TATTTCAGCA ATCCGGATGT AATATTCAGC TTTGCGGAGG AGATAGAACT GCTGTGCACC ACGGAAATGG TCTGCCGGGA AACGGCTATC AACAATTTTG GTAAACTGGG ACCTGAACAA AAGCTTTTTT TAAACGTAAA CCCGCGTACT ATGACTGATC CCAACTTTGT CAAAGGTGAA ACTCTAAAAA AGCTCGAAGA ATACGGTCTG ACTCCACAAA ATATTGTTTT TGAGATAACC GAACAACATA GCATTAAAAA TTATTATTTG TTCAAAAAGA CTGTTGAACA CTACCGCAAT CAGGGCTACC AGGTAGCTGC AGATGATGTG GGCGCAGGCT TTTCCGGATT ACAATCTATC GCCGAAATCC GCCCGGACTT TATTAAAGTA GATATGTCCC TGATTAGAGA CATACATATT AATCCAGTTA AAGAAGCAGT GGTAGAATCT CTTATTACCC TGGCTGAAAA AATAAACAGC CAGGTTATTG CAGAAGGAAT TGAATCACAA AATGAATTAA ACACCTTACT TTCACTGGGC GTTCACTTTG GACAAGGTTT TTATCTGGCA CGCCCGGCTT TTCCAAAACA AACTGTAAAC AAAACATTGA TTTCATACAT CAAGCGTCAA AAAAACAAGG ATTTAAATGG AAATTGGAGG CAGCCTTTAT CTATTGGGGA CATAGCTGTA CCGGCTGTTA TAATACATGA GGATACTTCG GTGGCTGAAG TCAAGGAAAA ATTAGACATG CTTTCACAAC CCATTGGCGG TGTGGTTGTA GTAAGAAAAG AGCGTCCCAT TGGTTTAGTG ATGCGTCACA AACTTTACCG CGTTCTCAGT TCACAGTATG GTGTGCCCTT GTACTGGCAG CGTCCGATAA GTGTAATAAT GGATTGTTCA CCTTTACAGG TGGAAAACCA TATAACAATT GAGCAAGCCG CTGAAATTGC TATGAATCGT GAACAAGATA AAATTTATGA TGATATTGTG GTTGTTGAAA AGGGCAAGCT TACAGGCGTT GTCACCATAC AAAAAATGCT GGATTCTATA ACCAAAATAC AAGTAGAACT GGCTAAGGGA GCTAATCCAC TAACCAGTTT ACCAGGTAAT GTGGCTATCG AACTAGAATT ATCCAGAAGA GCCGGAAATG GCCAAAATTG TATTGTCATT TATGCCGATT TGGACAGATT TAAATCTTAC AATGATACTT ATGGTTTTGA ACGAGGCGAT CAGATGATCA AGCTAACAGC CAGGATAGTT TCCCATGCCA CTAAAAAATA CGGTTCAAGA AATGATTTTG TGGGACATAT CGGCGGCGAC GACTTGATAA TAATTACACT GCCAGAATAT GCTGAACACA TTTGCCGCTC TATCGTGTTG CTTTTTGAAA GGCTGAAAAA GAGGTGCTTT TCCCCCAATG ATAGAGAACA AAGTGAATTC TACGGACAGG ACCGGGATGG TTTTCAAAAA TGGTTGCCCC TGGTATCCGT TTCCCTGGCC ATCGTGAAAT GCCAGGATAA AAAAAGTTAC CTGACCCTGG CGGAAAGAGC CGCACAACTT AAAAAATATG CTAAATCCTT GCCCGGCAGC GTCTATGTGC AAGATCGGTG TACAGATTAT AAAATACAAT AA
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Protein sequence | MISVKNTYRV FKEILMSNTG NILLRQSAKQ KLLTEKFACH ISRGKIIGVM YLDIVRFHEV QQIHGSIMVD RVLNLLEESL KKIITKFLPD DSVLAVENLW ADDFVILFTL SDKTSTEELS NLAVALRLSL RDNLSFQFIK LLGSELELHI GYAIIEPAAD IKHDIKLYNA LREAQKVAKG TLSLGTINLA KKFKELLSNH ELRSVYQPIV SLSSGEILGW EALTRGPENS YFSNPDVIFS FAEEIELLCT TEMVCRETAI NNFGKLGPEQ KLFLNVNPRT MTDPNFVKGE TLKKLEEYGL TPQNIVFEIT EQHSIKNYYL FKKTVEHYRN QGYQVAADDV GAGFSGLQSI AEIRPDFIKV DMSLIRDIHI NPVKEAVVES LITLAEKINS QVIAEGIESQ NELNTLLSLG VHFGQGFYLA RPAFPKQTVN KTLISYIKRQ KNKDLNGNWR QPLSIGDIAV PAVIIHEDTS VAEVKEKLDM LSQPIGGVVV VRKERPIGLV MRHKLYRVLS SQYGVPLYWQ RPISVIMDCS PLQVENHITI EQAAEIAMNR EQDKIYDDIV VVEKGKLTGV VTIQKMLDSI TKIQVELAKG ANPLTSLPGN VAIELELSRR AGNGQNCIVI YADLDRFKSY NDTYGFERGD QMIKLTARIV SHATKKYGSR NDFVGHIGGD DLIIITLPEY AEHICRSIVL LFERLKKRCF SPNDREQSEF YGQDRDGFQK WLPLVSVSLA IVKCQDKKSY LTLAERAAQL KKYAKSLPGS VYVQDRCTDY KIQ
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