Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1682 |
Symbol | |
ID | 8428648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1770341 |
End bp | 1770964 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645034015 |
Product | thiamine biosynthesis protein ThiF |
Protein accession | YP_003191162 |
Protein GI | 258514940 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000522342 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTT TTGAAAGATC ACTGGCTAAA AGCTTGGGCC GGGATAACCT GGCCAGAATT CAAAGAGTCA AGGTCGGCAT AGCCGGGGCC GGCGGGCTTG GTTCCAACTG TGCCCTGTTT CTGGTCCGGA GTGGGTTTAA AAGGCTCAGG CTGGTAGATT TTGACCTGGT GGAATACAGC AATTTAAACC GCCAATTTTT CTTTGCTGCC CAGGTTGGCC GTCAAAAGGT GGATGCCCTG AAGGAAAACC TGCTATTAAT TAATCCTAAA CTGGAAATAG AGATTATGCC GGAAAGGATT GAGCAGGAGA ATGCCGGTGA AATTTTTGCT GACTGCGATG CAGTGGTAGA AGCTTTGGAT CTGGCTGGGT CTAAAAAAAT GCTTGTGGAG GCCATTCTGA ACACGGGTAA GCTCCTGGTG GCGGCATCAG GCGTGGCAGG ATGGGGTAGA ATTGACGATA TCAAAATTTG CCGGGTGAAA AATAATTTCT ACCTGGTAGG AGATCTGGTT TCGGAGGCTG CTCCCGGCTG TCCTGTACTG GCCCCGGGTG TTAACGTGGC AGCGGCCAAA CAGGCTGATA TAGTTTTAAG TTATTTTTTG CGCTCCGACA AATTATGTTT ATGA
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Protein sequence | MNAFERSLAK SLGRDNLARI QRVKVGIAGA GGLGSNCALF LVRSGFKRLR LVDFDLVEYS NLNRQFFFAA QVGRQKVDAL KENLLLINPK LEIEIMPERI EQENAGEIFA DCDAVVEALD LAGSKKMLVE AILNTGKLLV AASGVAGWGR IDDIKICRVK NNFYLVGDLV SEAAPGCPVL APGVNVAAAK QADIVLSYFL RSDKLCL
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